High-resolution single-cell atlas reveals diversity and plasticity of tissue-resident neutrophils in non-small cell lung cancer
Non-small cell lung cancer (NSCLC) is characterized by molecular heterogeneity with
diverse immune cell infiltration patterns, which has been linked to therapy sensitivity and …
diverse immune cell infiltration patterns, which has been linked to therapy sensitivity and …
hdWGCNA identifies co-expression networks in high-dimensional transcriptomics data
Biological systems are immensely complex, organized into a multi-scale hierarchy of
functional units based on tightly regulated interactions between distinct molecules, cells …
functional units based on tightly regulated interactions between distinct molecules, cells …
[HTML][HTML] Remodeling of the immune and stromal cell compartment by PD-1 blockade in mismatch repair-deficient colorectal cancer
Immune checkpoint inhibitor (ICI) therapy can induce complete responses in mismatch
repair-deficient and microsatellite instability-high (d-MMR/MSI-H) colorectal cancers (CRCs) …
repair-deficient and microsatellite instability-high (d-MMR/MSI-H) colorectal cancers (CRCs) …
Selective advantage of mutant stem cells in human clonal hematopoiesis is associated with attenuated response to inflammation and aging
Clonal hematopoiesis (CH) arises when hematopoietic stem cells (HSCs) acquire mutations,
most frequently in the DNMT3A and TET2 genes, conferring a competitive advantage …
most frequently in the DNMT3A and TET2 genes, conferring a competitive advantage …
Map** human adult hippocampal neurogenesis with single-cell transcriptomics: reconciling controversy or fueling the debate?
The notion of exploiting the regenerative potential of the human brain in physiological aging
or neurological diseases represents a particularly attractive alternative to conventional …
or neurological diseases represents a particularly attractive alternative to conventional …
Neuronal ambient RNA contamination causes misinterpreted and masked cell types in brain single-nuclei datasets
Ambient RNA contamination in single-cell and single-nuclei RNA sequencing (snRNA-seq)
is a significant problem, but its consequences are poorly understood. Here, we show that …
is a significant problem, but its consequences are poorly understood. Here, we show that …
Brassinosteroid gene regulatory networks at cellular resolution in the Arabidopsis root
Brassinosteroids are plant steroid hormones that regulate diverse processes, such as cell
division and cell elongation, through gene regulatory networks that vary in space and time …
division and cell elongation, through gene regulatory networks that vary in space and time …
Generating human neural diversity with a multiplexed morphogen screen in organoids
Morphogens choreograph the generation of remarkable cellular diversity in the develo**
nervous system. Differentiation of stem cells in vitro often relies upon the combinatorial …
nervous system. Differentiation of stem cells in vitro often relies upon the combinatorial …
Representing and extracting knowledge from single-cell data
IS Mihai, S Chafle, J Henriksson - Biophysical Reviews, 2024 - Springer
Single-cell analysis is currently one of the most high-resolution techniques to study biology.
The large complex datasets that have been generated have spurred numerous …
The large complex datasets that have been generated have spurred numerous …
Neuronal identity defines α-synuclein and tau toxicity
R Praschberger, S Kuenen, N Schoovaerts, N Kaempf… - Neuron, 2023 - cell.com
Pathogenic α-synuclein and tau are critical drivers of neurodegeneration, and their
mutations cause neuronal loss in patients. Whether the underlying preferential neuronal …
mutations cause neuronal loss in patients. Whether the underlying preferential neuronal …