Determinants of genetic diversity

H Ellegren, N Galtier - Nature Reviews Genetics, 2016 - nature.com
Genetic polymorphism varies among species and within genomes, and has important
implications for the evolution and conservation of species. The determinants of this variation …

Interpreting the genomic landscape of speciation: a road map for finding barriers to gene flow

M Ravinet, R Faria, RK Butlin, J Galindo… - Journal of …, 2017 - academic.oup.com
Speciation, the evolution of reproductive isolation among populations, is continuous,
complex, and involves multiple, interacting barriers. Until it is complete, the effects of this …

Linkage disequilibrium–dependent architecture of human complex traits shows action of negative selection

S Gazal, HK Finucane, NA Furlotte, PR Loh… - Nature …, 2017 - nature.com
Recent work has hinted at the linkage disequilibrium (LD)-dependent architecture of human
complex traits, where SNPs with low levels of LD (LLD) have larger per-SNP heritability …

Signatures of negative selection in the genetic architecture of human complex traits

J Zeng, R De Vlaming, Y Wu, MR Robinson… - Nature …, 2018 - nature.com
We develop a Bayesian mixed linear model that simultaneously estimates single-nucleotide
polymorphism (SNP)-based heritability, polygenicity (proportion of SNPs with nonzero …

Going global by adapting local: A review of recent human adaptation

S Fan, MEB Hansen, Y Lo, SA Tishkoff - Science, 2016 - science.org
The spread of modern humans across the globe has led to genetic adaptations to diverse
local environments. Recent developments in genomic technologies, statistical analyses, and …

Linked selection and recombination rate variation drive the evolution of the genomic landscape of differentiation across the speciation continuum of Ficedula …

R Burri, A Nater, T Kawakami, CF Mugal… - Genome …, 2015 - genome.cshlp.org
Speciation is a continuous process during which genetic changes gradually accumulate in
the genomes of diverging species. Recent studies have documented highly heterogeneous …

[HTML][HTML] Genetic ancestry and natural selection drive population differences in immune responses to pathogens

Y Nédélec, J Sanz, G Baharian, ZA Szpiech, A Pacis… - Cell, 2016 - cell.com
Individuals from different populations vary considerably in their susceptibility to immune-
related diseases. To understand how genetic variation and natural selection contribute to …

[HTML][HTML] Functional genetic variants revealed by massively parallel precise genome editing

E Sharon, SAA Chen, NM Khosla, JD Smith… - Cell, 2018 - cell.com
A major challenge in genetics is to identify genetic variants driving natural phenotypic
variation. However, current methods of genetic map** have limited resolution. To address …

Recent Selective Sweeps in North American Drosophila melanogaster Show Signatures of Soft Sweeps

NR Garud, PW Messer, EO Buzbas, DA Petrov - PLoS genetics, 2015 - journals.plos.org
Adaptation from standing genetic variation or recurrent de novo mutation in large
populations should commonly generate soft rather than hard selective sweeps. In contrast to …

[HTML][HTML] An ancient viral epidemic involving host coronavirus interacting genes more than 20,000 years ago in East Asia

Y Souilmi, ME Lauterbur, R Tobler, CD Huber… - Current Biology, 2021 - cell.com
The current severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic has
emphasized the vulnerability of human populations to novel viral pressures, despite the vast …