Mobile genetic elements associated with antimicrobial resistance

SR Partridge, SM Kwong, N Firth… - Clinical microbiology …, 2018 - Am Soc Microbiol
Strains of bacteria resistant to antibiotics, particularly those that are multiresistant, are an
increasing major health care problem around the world. It is now abundantly clear that both …

What makes a megaplasmid?

JPJ Hall, J Botelho, A Cazares… - … Transactions of the …, 2022 - royalsocietypublishing.org
Naturally occurring plasmids come in different sizes. The smallest are less than a kilobase of
DNA, while the largest can be over three orders of magnitude larger. Historically, research …

Structural mechanism of bridge RNA-guided recombination

M Hiraizumi, NT Perry, MG Durrant, T Soma… - Nature, 2024 - nature.com
Insertion sequence (IS) elements are the simplest autonomous transposable elements found
in prokaryotic genomes. We recently discovered that IS110 family elements encode a …

ISEScan: automated identification of insertion sequence elements in prokaryotic genomes

Z **e, H Tang - Bioinformatics, 2017 - academic.oup.com
Motivation The insertion sequence (IS) elements are the smallest but most abundant
autonomous transposable elements in prokaryotic genomes, which play a key role in …

Targeting plasmids to limit acquisition and transmission of antimicrobial resistance

CO Vrancianu, LI Popa, C Bleotu… - Frontiers in …, 2020 - frontiersin.org
Antimicrobial resistance (AMR) is a significant global threat to both public health and the
environment. The emergence and expansion of AMR is sustained by the enormous diversity …

Structural and sequence diversity of eukaryotic transposable elements

KK Kojima - Genes & Genetic Systems, 2019 - jstage.jst.go.jp
The majority of eukaryotic genomes contain a large fraction of repetitive sequences that
primarily originate from transpositional bursts of transposable elements (TEs). Repbase …

ISC, a novel group of bacterial and archaeal DNA transposons that encode Cas9 homologs

VV Kapitonov, KS Makarova, EV Koonin - Journal of bacteriology, 2016 - Am Soc Microbiol
Bacterial genomes encode numerous homologs of Cas9, the effector protein of the type II
CRISPR-Cas systems. The homology region includes the arginine-rich helix and the HNH …

An analysis of the IS6/IS26 family of insertion sequences: is it a single family?

CJ Harmer, RM Hall - Microbial genomics, 2019 - microbiologyresearch.org
The relationships within a curated set of 112 insertion sequences (ISs) currently assigned to
the IS 6 family, here re-named the IS 6/IS 26 family, in the ISFinder database were …

Is ICE hot? A genomic comparative study reveals integrative and conjugative elements as “hot” vectors for the dissemination of antibiotic resistance genes

Q Zheng, L Li, X Yin, Y Che, T Zhang - Msystems, 2023 - Am Soc Microbiol
The dissemination of antibiotic resistance genes (ARGs) driven by mobile genetic elements
(MGEs), especially among pathogenic bacteria, is of increasing global concern. Different …

Transposition of Tn125 Encoding the NDM-1 Carbapenemase in Acinetobacter baumannii

S Bontron, P Nordmann, L Poirel - Antimicrobial agents and …, 2016 - Am Soc Microbiol
The bla NDM-1 gene encodes a carbapenemase that confers resistance to almost all β-
lactams, including last-resort carbapenems. This is increasingly reported worldwide in …