A tutorial review of functional connectivity analysis methods and their interpretational pitfalls

AM Bastos, JM Schoffelen - Frontiers in systems neuroscience, 2016 - frontiersin.org
Oscillatory neuronal activity may provide a mechanism for dynamic network coordination.
Rhythmic neuronal interactions can be quantified using multiple metrics, each with their own …

Advancing functional connectivity research from association to causation

AT Reid, DB Headley, RD Mill… - Nature …, 2019 - nature.com
Cognition and behavior emerge from brain network interactions, such that investigating
causal interactions should be central to the study of brain function. Approaches that …

Breathing coordinates cortico-hippocampal dynamics in mice during offline states

N Karalis, A Sirota - Nature communications, 2022 - nature.com
Network dynamics have been proposed as a mechanistic substrate for the information
transfer across cortical and hippocampal circuits. However, little is known about the …

Toward naturalistic neuroscience: Mechanisms underlying the flattening of brain hierarchy in movie-watching compared to rest and task

ML Kringelbach, YS Perl, E Tagliazucchi, G Deco - Science Advances, 2023 - science.org
Identifying the functional specialization of the brain has moved from using cognitive tasks
and resting state to using ecological relevant, naturalistic movies. We leveraged a large …

Thalamic amplification of cortical connectivity sustains attentional control

LI Schmitt, RD Wimmer, M Nakajima, M Happ… - Nature, 2017 - nature.com
Although interactions between the thalamus and cortex are critical for cognitive function,,,
the exact contribution of the thalamus to these interactions remains unclear. Recent studies …

Granger causality analysis in neuroscience and neuroimaging

AK Seth, AB Barrett, L Barnett - Journal of Neuroscience, 2015 - Soc Neuroscience
A key challenge in neuroscience and, in particular, neuroimaging, is to move beyond
identification of regional activations toward the characterization of functional circuits …

Alpha and gamma oscillations characterize feedback and feedforward processing in monkey visual cortex

T Van Kerkoerle, MW Self, B Dagnino… - Proceedings of the …, 2014 - National Acad Sciences
Cognitive functions rely on the coordinated activity of neurons in many brain regions, but the
interactions between cortical areas are not yet well understood. Here we investigated …

The generation and propagation of the human alpha rhythm

M Halgren, I Ulbert, H Bastuji, D Fabó… - Proceedings of the …, 2019 - National Acad Sciences
The alpha rhythm is the longest-studied brain oscillation and has been theorized to play a
key role in cognition. Still, its physiology is poorly understood. In this study, we used …

[書籍][B] Transfer entropy

T Bossomaier, L Barnett, M Harré, JT Lizier… - 2016 - Springer
Transfer Entropy Page 1 Chapter 4 Transfer Entropy In this chapter we get to the essential
mathematics of the book—a detailed discussion of transfer entropy. To begin with we look at …

Investigating large-scale brain dynamics using field potential recordings: analysis and interpretation

B Pesaran, M Vinck, GT Einevoll, A Sirota, P Fries… - Nature …, 2018 - nature.com
New technologies to record electrical activity from the brain on a massive scale offer
tremendous opportunities for discovery. Electrical measurements of large-scale brain …