Global dimensions of plant virus diseases: current status and future perspectives

RAC Jones, RA Naidu - Annual review of virology, 2019 - annualreviews.org
Viral diseases provide a major challenge to twenty-first century agriculture worldwide.
Climate change and human population pressures are driving rapid alterations in agricultural …

Prospects and challenges of implementing DNA metabarcoding for high-throughput insect surveillance

AM Piper, J Batovska, NOI Cogan, J Weiss… - …, 2019 - academic.oup.com
Trap-based surveillance strategies are widely used for monitoring of invasive insect species,
aiming to detect newly arrived exotic taxa as well as track the population levels of …

High-throughput sequencing in plant disease management: a comprehensive review of benefits, challenges, and future perspectives

MM Nizamani, Q Zhang, G Muhae-Ud-Din… - Phytopathology …, 2023 - Springer
High-throughput sequencing (HTS) has instigated a paradigm shift in plant pathology,
showcasing its transformative role in the management of plant diseases. As a powerful tool …

[HTML][HTML] New-generation sequencing technology in diagnosis of fungal plant pathogens: a dream comes true?

M Aragona, A Haegi, MT Valente, L Riccioni, L Orzali… - Journal of Fungi, 2022 - mdpi.com
The fast and continued progress of high-throughput sequencing (HTS) and the drastic
reduction of its costs have boosted new and unpredictable developments in the field of plant …

[HTML][HTML] Guidelines for the reliable use of high throughput sequencing technologies to detect plant pathogens and pests

S Massart, I Adams, M Al Rwahnih… - Peer Community …, 2022 - peercommunityjournal.org
High-throughput sequencing (HTS) technologies have the potential to become one of the
most significant advances in molecular diagnostics. Their use by researchers to detect and …

Metagenomics approaches for the detection and surveillance of emerging and recurrent plant pathogens

E Piombo, A Abdelfattah, S Droby, M Wisniewski… - Microorganisms, 2021 - mdpi.com
Globalization has a dramatic effect on the trade and movement of seeds, fruits and
vegetables, with a corresponding increase in economic losses caused by the introduction of …

Facilitating the adoption of high‐throughput sequencing technologies as a plant pest diagnostic test in laboratories: A step‐by‐step description

B Lebas, I Adams, M Al Rwahnih, S Baeyen… - EPPO …, 2022 - Wiley Online Library
High‐throughput sequencing (HTS) is a powerful tool that enables the simultaneous
detection and potential identification of any organisms present in a sample. The growing …

Genomic biosurveillance of forest invasive alien enemies: A story written in code

RC Hamelin, AD Roe - Evolutionary Applications, 2020 - Wiley Online Library
The world's forests face unprecedented threats from invasive insects and pathogens that can
cause large irreversible damage to the ecosystems. This threatens the world's capacity to …

[HTML][HTML] Characterization of potato virus Y isolates and assessment of nanopore sequencing to detect and genotype potato viruses

M Della Bartola, S Byrne, E Mullins - Viruses, 2020 - mdpi.com
Potato virus Y (PVY) is the most economically important virus infecting cultivated potato
(Solanum tuberosum L.). Accurate diagnosis is crucial to regulate the trade of tubers and for …

Integrating High throughput Sequencing into Survey Design Reveals Turnip Yellows Virus and Soybean Dwarf Virus in Pea (Pisum Sativum) in the United Kingdom

AR Fowkes, S McGreig, H Pufal, S Duffy, B Howard… - Viruses, 2021 - mdpi.com
There is only limited knowledge of the presence and incidence of viruses in peas within the
United Kingdom, therefore high-throughput sequencing (HTS) in combination with a bulk …