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A stochastic vs deterministic perspective on the timing of cellular events
Cells are the fundamental units of life, and like all life forms, they change over time. Changes
in cell state are driven by molecular processes; of these many are initiated when molecule …
in cell state are driven by molecular processes; of these many are initiated when molecule …
Fundamental properties of Ca2+ signals
BACKGROUND: Ca2+ is a ubiquitous and versatile second messenger that transmits
information through changes of the cytosolic Ca2+ concentration. Recent investigations …
information through changes of the cytosolic Ca2+ concentration. Recent investigations …
[KNIHA][B] Models of calcium signalling
The interactions between mathematics and physiology have a long and illustrious history, of
which the study of calcium signalling is but a small chapter. Nevertheless, for those involved …
which the study of calcium signalling is but a small chapter. Nevertheless, for those involved …
Calcium oscillations
Abstract Changes in cellular Ca 2+ concentration control a wide range of physiological
processes, from the subsecond release of synaptic neurotransmitters, to the regulation of …
processes, from the subsecond release of synaptic neurotransmitters, to the regulation of …
The influence of Ca2+ buffers on free [Ca2+] fluctuations and the effective volume of Ca2+ microdomains
Abstract Intracellular calcium (Ca 2+) plays a significant role in many cell signaling
pathways, some of which are localized to spatially restricted microdomains. Ca 2+ binding …
pathways, some of which are localized to spatially restricted microdomains. Ca 2+ binding …
Calcium-dependent inactivation and the dynamics of calcium puffs and sparks
JR Groff, GD Smith - Journal of theoretical biology, 2008 - Elsevier
Localized intracellular Ca2+ elevations known as puffs and sparks arise from the
cooperative activity of inositol 1, 4, 5-trisphosphate receptor Ca2+ channels (IP3Rs) and …
cooperative activity of inositol 1, 4, 5-trisphosphate receptor Ca2+ channels (IP3Rs) and …
Toward a predictive model of Ca2+ puffs
We investigate the key characteristics of Ca 2+ puffs in deterministic and stochastic
frameworks that all incorporate the cellular morphology of IP 3 receptor channel clusters. In …
frameworks that all incorporate the cellular morphology of IP 3 receptor channel clusters. In …
Markov chain Monte Carlo fitting of single-channel data from inositol trisphosphate receptors
In many cell types, the inositol trisphosphate receptor (IPR) is one of the important
components that control intracellular calcium dynamics, and an understanding of this …
components that control intracellular calcium dynamics, and an understanding of this …
[HTML][HTML] Understanding cardiac alternans: a piecewise linear modeling framework
Cardiac alternans is a beat-to-beat alternation in action potential duration (APD) and
intracellular calcium (Ca 2+) cycling seen in cardiac myocytes under rapid pacing that is …
intracellular calcium (Ca 2+) cycling seen in cardiac myocytes under rapid pacing that is …
Hierarchic Stochastic Modelling Applied to Intracellular Ca2+ Signals
Important biological processes like cell signalling and gene expression have noisy
components and are very complex at the same time. Mathematical analysis of such systems …
components and are very complex at the same time. Mathematical analysis of such systems …