The epithelial–mesenchymal plasticity landscape: principles of design and mechanisms of regulation

J Haerinck, S Goossens, G Berx - Nature Reviews Genetics, 2023 - nature.com
Epithelial–mesenchymal plasticity (EMP) enables cells to interconvert between several
states across the epithelial–mesenchymal landscape, thereby acquiring hybrid epithelial …

Single-cell technologies: From research to application

L Wen, G Li, T Huang, W Geng, H Pei, J Yang, M Zhu… - The Innovation, 2022 - cell.com
In recent years, more and more single-cell technologies have been developed. A vast
amount of single-cell omics data has been generated by large projects, such as the Human …

Compressive stresses in cancer: characterization and implications for tumour progression and treatment

JA Linke, LL Munn, RK Jain - Nature Reviews Cancer, 2024 - nature.com
Beyond their many well-established biological aberrations, solid tumours create an
abnormal physical microenvironment that fuels cancer progression and confers treatment …

Volumetric compression by heterogeneous scaffold embedding promotes cerebral organoid maturation and does not impede growth

X Tang, Z Wang, D Khutsishvili, Y Cheng, J Wang… - Cell Systems, 2023 - cell.com
Although biochemical regulation has been extensively studied in organoid modeling
protocols, the role of mechanoregulation in directing stem cell fate and organoid …

Compression drives diverse transcriptomic and phenotypic adaptations in melanoma

X Zhang, X Shi, D Zhang, X Gong, Z Wen… - Proceedings of the …, 2023 - pnas.org
Physical forces are prominent during tumor progression. However, it is still unclear how they
impact and drive the diverse phenotypes found in cancer. Here, we apply an integrative …

Epigenetic memory acquired during long-term EMT induction governs the recovery to the epithelial state

P Jain, S Corbo, K Mohammad… - Journal of the …, 2023 - royalsocietypublishing.org
Epithelial–mesenchymal transition (EMT) and its reverse mesenchymal–epithelial transition
(MET) are critical during embryonic development, wound healing and cancer metastasis …

Volumetric compression for engineering living systems

Y Li, M Guo - Nature Reviews Bioengineering, 2024 - nature.com
Life, as a dense manifestation of soft matter, undergoes changes in water content,
biomacromolecular concentrations, condensation and crowding due to volumetric …

[HTML][HTML] Increased heterogeneity in expression of genes associated with cancer progression and drug resistance

A Bose, S Datta, R Mandal, U Ray, R Dhar - Translational Oncology, 2024 - Elsevier
Fluctuations in the number of regulatory molecules and differences in timings of molecular
events can generate variation in gene expression among genetically identical cells in the …

Cancer spreading patterns based on epithelial-mesenchymal plasticity

R Wang, Z Yan - Frontiers in Cell and Developmental Biology, 2024 - frontiersin.org
Introduction: Metastasis is a major cause of cancer-related deaths, underscoring the
necessity to discern the rules and patterns of cancer cell spreading. Epithelial-mesenchymal …

Living in a noisy world—origins of gene expression noise and its impact on cellular decision‐making

S Pal, R Dhar - FEBS letters, 2024 - Wiley Online Library
The expression level of a gene can vary between genetically identical cells under the same
environmental condition—a phenomenon referred to as gene expression noise. Several …