The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text
Background Determining usefulness of biomedical text mining systems requires realistic
task definition and data selection criteria without artificial constraints, measuring …
task definition and data selection criteria without artificial constraints, measuring …
myAURA: a personalized health library for epilepsy management via knowledge graph sparsification and visualization
Objectives Report the development of the patient-centered myAURA application and suite of
methods designed to aid epilepsy patients, caregivers, and clinicians in making decisions …
methods designed to aid epilepsy patients, caregivers, and clinicians in making decisions …
Distance closures on complex networks
To expand the toolbox available to network science, we study the isomorphism between
distance and Fuzzy (proximity or strength) graphs. Distinct transitive closures in Fuzzy …
distance and Fuzzy (proximity or strength) graphs. Distinct transitive closures in Fuzzy …
Extraction of pharmacokinetic evidence of drug–drug interactions from the literature
Drug-drug interaction (DDI) is a major cause of morbidity and mortality and a subject of
intense scientific interest. Biomedical literature mining can aid DDI research by extracting …
intense scientific interest. Biomedical literature mining can aid DDI research by extracting …
Classification of research papers on radio frequency electromagnetic field (RF-EMF) using graph neural networks (GNN)
This study compares the performance of graph convolutional neural network (GCN) models
with conventional natural language processing (NLP) models for classifying scientific …
with conventional natural language processing (NLP) models for classifying scientific …
Evaluation of linear classifiers on articles containing pharmacokinetic evidence of drug-drug interactions
Background. Drug-drug interaction (DDI) is a major cause of morbidity and mortality. DDI
research includes the study of different aspects of drug interactions, from in vitro …
research includes the study of different aspects of drug interactions, from in vitro …
Measuring climate change on Twitter using Google's algorithm: Perception and events
Purpose–The purpose of this paper is to test the hypothesis of whether more complex and
emergent hashtags can be sufficient pointers to climate change events. Human-induced …
emergent hashtags can be sufficient pointers to climate change events. Human-induced …
Simple and efficient machine learning frameworks for identifying protein-protein interaction relevant articles and experimental methods used to study the interactions
Background Protein-protein interaction (PPI) is an important biomedical phenomenon.
Automatically detecting PPI-relevant articles and identifying methods that are used to study …
Automatically detecting PPI-relevant articles and identifying methods that are used to study …
Hybrid methods of bibliographic coupling and text similarity measurement for biomedical paper recommendation
The amount of available scientific literature is increasing, and studies have proposed
various methods for evaluating document-document similarity in order to cluster or classify …
various methods for evaluating document-document similarity in order to cluster or classify …
Selecting focused digital cohorts from social media using the metric backbone of biomedical knowledge graphs
The abundance of social media data allows researchers to construct large digital cohorts to
study the interplay between human behavior and medical treatment. Identifying the users …
study the interplay between human behavior and medical treatment. Identifying the users …