A parallel nonuniform fast Fourier transform library based on an “exponential of semicircle" kernel

AH Barnett, J Magland, L af Klinteberg - SIAM Journal on Scientific Computing, 2019 - SIAM
The nonuniform fast Fourier transform (NUFFT) generalizes the FFT to off-grid data. Its many
applications include image reconstruction, data analysis, and the numerical solution of …

Aliasing error of the exp⁡(β1− z2) kernel in the nonuniform fast Fourier transform

AH Barnett - Applied and Computational Harmonic Analysis, 2021 - Elsevier
The most popular algorithm for the nonuniform fast Fourier transform (NUFFT) uses the
dilation of a kernel ϕ to spread (or interpolate) between given nonuniform points and a …

A highly accurate boundary integral equation method for surfactant-laden drops in 3D

C Sorgentone, AK Tornberg - Journal of Computational Physics, 2018 - Elsevier
The presence of surfactants alters the dynamics of viscous drops immersed in an ambient
viscous fluid. This is specifically true at small scales, such as in applications of droplet based …

Optimal slip velocities of micro-swimmers with arbitrary axisymmetric shapes

H Guo, H Zhu, R Liu, M Bonnet… - Journal of Fluid …, 2021 - cambridge.org
This article presents a computational approach for determining the optimal slip velocities on
any given shape of an axisymmetric micro-swimmer suspended in a viscous fluid. The …

An integral equation formulation for rigid bodies in Stokes flow in three dimensions

E Corona, L Greengard, M Rachh… - Journal of Computational …, 2017 - Elsevier
We present a new derivation of a boundary integral equation (BIE) for simulating the three-
dimensional dynamics of arbitrarily-shaped rigid particles of genus zero immersed in a …

A 3D boundary integral method for the electrohydrodynamics of surfactant-covered drops

C Sorgentone, AK Tornberg, PM Vlahovska - Journal of Computational …, 2019 - Elsevier
We present a highly accurate numerical method based on a boundary integral formulation
and the leaky dielectric model to study the dynamics of surfactant-covered drops in the …

cuFINUFFT: a load-balanced GPU library for general-purpose nonuniform FFTs

Y Shih, G Wright, J Andén, J Blaschke… - 2021 IEEE …, 2021 - ieeexplore.ieee.org
Nonuniform fast Fourier transforms dominate the computational cost in many applications
including image reconstruction and signal processing. We thus present a general-purpose …

Boundary integral equation analysis for suspension of spheres in Stokes flow

E Corona, S Veerapaneni - Journal of Computational Physics, 2018 - Elsevier
We show that the standard boundary integral operators, defined on the unit sphere, for the
Stokes equations diagonalize on a specific set of vector spherical harmonics and provide …

A cell-resolved, Lagrangian solver for modeling red blood cell dynamics in macroscale flows

G Rydquist, M Esmaily - Journal of computational physics, 2022 - Elsevier
When red blood cells (RBCs) experience non-physiologically high stresses, eg, in medical
devices, they can rupture in a process called hemolysis. Directly simulating this process is …

General-purpose kernel regularization of boundary integral equations via density interpolation

LM Faria, C Pérez-Arancibia, M Bonnet - Computer Methods in Applied …, 2021 - Elsevier
This paper presents a general high-order kernel regularization technique applicable to all
four integral operators of Calderón calculus associated with linear elliptic PDEs in two and …