Nicotinamide riboside attenuates age-associated metabolic and functional changes in hematopoietic stem cells

X Sun, B Cao, M Naval-Sanchez, T Pham… - Nature …, 2021 - nature.com
With age, hematopoietic stem cells (HSC) undergo changes in function, including reduced
regenerative potential and loss of quiescence, which is accompanied by a significant …

A comprehensive workflow for optimizing RNA-seq data analysis

G Jiang, JY Zheng, SN Ren, W Yin, X **a, Y Li… - BMC genomics, 2024 - Springer
Background Current RNA-seq analysis software for RNA-seq data tends to use similar
parameters across different species without considering species-specific differences …

Evolutionary shifts in taste coding in the fruit pest Drosophila suzukii

HKM Dweck, GJS Talross, W Wang, JR Carlson - Elife, 2021 - elifesciences.org
Although most Drosophila species lay eggs in overripe fruit, the agricultural pest Drosophila
suzukii lays eggs in ripe fruit. We found that changes in bitter taste perception have …

A Solanum lycopersicoides reference genome facilitates insights into tomato specialized metabolism and immunity

AF Powell, A Feder, J Li, MHW Schmidt… - The Plant …, 2022 - Wiley Online Library
Wild relatives of tomato are a valuable source of natural variation in tomato breeding, as
many can be hybridized to the cultivated species (Solanum lycopersicum). Several …

Integrated analysis of genomics and transcriptomics revealed the genetic basis for goaty flavor formation in goat milk

F Zhang, C Shi, Q He, L Zhu, J Zhao, W Yao, JJ Loor… - Genomics, 2024 - Elsevier
Goat milk exhibits a robust and distinctive “goaty” flavor. However, the underlying genetic
basis of goaty flavor remains elusive and requires further elucidation at the genomic level …

Positive selection and heat‐response transcriptomes reveal adaptive features of the Brassicaceae desert model, Anastatica hierochuntica

G Eshel, N Duppen, G Wang, DH Oh… - New …, 2022 - Wiley Online Library
Plant adaptation to a desert environment and its endemic heat stress is poorly understood at
the molecular level. The naturally heat‐tolerant Brassicaceae species Anastatica …

[HTML][HTML] Energy consumption and carbon emissions of mandatory green certified offices in Australia: Evidence and lessons learnt across 2011–2020

S Kim, BTH Lim, BL Oo - Sustainability, 2022 - mdpi.com
With the changing trends in global climate and increasing awareness of the environmental
impact of the built environment, private and public sector building stakeholders are under …

Integrated Bioinformatics Analyses of PIN1, CKX, and Yield-Related Genes Reveals the Molecular Mechanisms for the Difference of Seed Number Per Pod Between …

LM Liu, HQ Zhang, K Cheng, YM Zhang - Frontiers in Plant Science, 2021 - frontiersin.org
There is limited advancement on seed number per pod (SNPP) in soybean breeding,
resulting in low yield in China. To address this issue, we identified PIN1 and CKX gene …

Decoding bee cleptoparasitism through comparative transcriptomics of Coelioxoides waltheriae and its host Tetrapedia diversipes

PC Ricardo, MC Arias, N de Souza Araujo - Scientific Reports, 2024 - nature.com
Cleptoparasitism, also known as brood parasitism, is a widespread strategy among bee
species in which the parasite lays eggs into the nests of the host species. Even though this …

A phylogenetic framework to simulate synthetic interspecies RNA-Seq data

P Bastide, C Soneson, DB Stern… - Molecular Biology …, 2023 - academic.oup.com
Interspecies RNA-Seq datasets are increasingly common, and have the potential to answer
new questions about the evolution of gene expression. Single-species differential …