Statistical shape models for 3D medical image segmentation: a review

T Heimann, HP Meinzer - Medical image analysis, 2009 - Elsevier
Statistical shape models (SSMs) have by now been firmly established as a robust tool for
segmentation of medical images. While 2D models have been in use since the early 1990s …

Challenges and methodologies of fully automatic whole heart segmentation: a review

X Zhuang - Journal of healthcare engineering, 2013 - Wiley Online Library
Whole heart segmentation from magnetic resonance imaging or computed tomography is a
prerequisite for many clinical applications. Since manual delineation can be tedious and …

A topological loss function for deep-learning based image segmentation using persistent homology

JR Clough, N Byrne, I Oksuz, VA Zimmer… - IEEE transactions on …, 2020 - ieeexplore.ieee.org
We introduce a method for training neural networks to perform image or volume
segmentation in which prior knowledge about the topology of the segmented object can be …

[HTML][HTML] Test-time adaptable neural networks for robust medical image segmentation

N Karani, E Erdil, K Chaitanya, E Konukoglu - Medical Image Analysis, 2021 - Elsevier
Abstract Convolutional Neural Networks (CNNs) work very well for supervised learning
problems when the training dataset is representative of the variations expected to be …

[LIBRO][B] Statistical shape analysis: with applications in R

IL Dryden, KV Mardia - 2016 - books.google.com
A thoroughly revised and updated edition of this introduction to modern statistical methods
for shape analysis Shape analysis is an important tool in the many disciplines where objects …

A survey on shape correspondence

O Van Kaick, H Zhang, G Hamarneh… - Computer graphics …, 2011 - Wiley Online Library
We review methods designed to compute correspondences between geometric shapes
represented by triangle meshes, contours or point sets. This survey is motivated in part by …

Principal geodesic analysis for the study of nonlinear statistics of shape

PT Fletcher, C Lu, SM Pizer… - IEEE transactions on …, 2004 - ieeexplore.ieee.org
A primary goal of statistical shape analysis is to describe the variability of a population of
geometric objects. A standard technique for computing such descriptions is principal …

Auto-context and its application to high-level vision tasks and 3D brain image segmentation

Z Tu, X Bai - IEEE transactions on pattern analysis and …, 2009 - ieeexplore.ieee.org
The notion of using context information for solving high-level vision and medical image
segmentation problems has been increasingly realized in the field. However, how to learn …

A generative model for image segmentation based on label fusion

MR Sabuncu, BTT Yeo, K Van Leemput… - IEEE transactions on …, 2010 - ieeexplore.ieee.org
We propose a nonparametric, probabilistic model for the automatic segmentation of medical
images, given a training set of images and corresponding label maps. The resulting …

3d skeletons: A state‐of‐the‐art report

A Tagliasacchi, T Delame, M Spagnuolo… - Computer Graphics …, 2016 - Wiley Online Library
Given a shape, a skeleton is a thin centered structure which jointly describes the topology
and the geometry of the shape. Skeletons provide an alternative to classical boundary or …