The rise of the distributions: why non-normality is important for understanding the transcriptome and beyond
JC Mar - Biophysical reviews, 2019 - Springer
The application of statistics has been instrumental in clarifying our understanding of the
genome. While insights have been derived for almost all levels of genome function, most …
genome. While insights have been derived for almost all levels of genome function, most …
The pediatric cell atlas: defining the growth phase of human development at single-cell resolution
Single-cell gene expression analyses of mammalian tissues have uncovered profound
stage-specific molecular regulatory phenomena that have changed the understanding of …
stage-specific molecular regulatory phenomena that have changed the understanding of …
Metabolic and epigenetic dysfunctions underlie the arrest of in vitro fertilized human embryos in a senescent-like state
Y Yang, L Shi, X Fu, G Ma, Z Yang, Y Li, Y Zhou… - PLoS …, 2022 - journals.plos.org
Around 60% of in vitro fertilized (IVF) human embryos irreversibly arrest before compaction
between the 3-to 8-cell stage, posing a significant clinical problem. The mechanisms behind …
between the 3-to 8-cell stage, posing a significant clinical problem. The mechanisms behind …
Varying intolerance of gene pathways to mutational classes explain genetic convergence across neuropsychiatric disorders
Genetic susceptibility to intellectual disability (ID), autism spectrum disorder (ASD), and
schizophrenia (SCZ) often arises from mutations in the same genes, suggesting that they …
schizophrenia (SCZ) often arises from mutations in the same genes, suggesting that they …
TRIM13 inhibited cell proliferation and induced cell apoptosis by regulating NF-κB pathway in non-small-cell lung carcinoma cells
L Xu, Q Wu, X Zhou, Q Wu, M Fang - Gene, 2019 - Elsevier
Abstract Tripartite Motif Containing 13 (TRIM13), a member of TRIM proteins, is deleted in
multiple tumor types, especially in B-cell chronic lymphocytic leukemia and multiple …
multiple tumor types, especially in B-cell chronic lymphocytic leukemia and multiple …
Linking telomere regulation to stem cell pluripotency
L Liu - Trends in Genetics, 2017 - cell.com
Embryonic stem cells (ESCs), somatic cell nuclear transfer ESCs, and induced pluripotent
stem cells (iPSCs) represent the most studied group of PSCs. Unlimited self-renewal without …
stem cells (iPSCs) represent the most studied group of PSCs. Unlimited self-renewal without …
Gene expression variability and the analysis of large-scale RNA-seq studies with the MDSeq
Rapidly decreasing cost of next-generation sequencing has led to the recent availability of
large-scale RNA-seq data, that empowers the analysis of gene expression variability, in …
large-scale RNA-seq data, that empowers the analysis of gene expression variability, in …
Evaluating biomarkers to model cancer risk post cosmic ray exposure
DM Sridharan, A Asaithamby, SR Blattnig… - Life sciences in space …, 2016 - Elsevier
Robust predictive models are essential to manage the risk of radiation-induced
carcinogenesis. Chronic exposure to cosmic rays in the context of the complex deep space …
carcinogenesis. Chronic exposure to cosmic rays in the context of the complex deep space …
Genome‐wide detection of copy number variants in European autochthonous and commercial pig breeds by whole‐genome sequencing of DNA pools identified …
In this study, we identified copy number variants (CNVs) in 19 European autochthonous pig
breeds and in two commercial breeds (Italian Large White and Italian Duroc) that represent …
breeds and in two commercial breeds (Italian Large White and Italian Duroc) that represent …
RNA helicase, DDX27 regulates skeletal muscle growth and regeneration by modulation of translational processes
AH Bennett, MF O'Donohue, SR Gundry, AT Chan… - PLoS …, 2018 - journals.plos.org
Gene expression in a tissue-specific context depends on the combined efforts of epigenetic,
transcriptional and post-transcriptional processes that lead to the production of specific …
transcriptional and post-transcriptional processes that lead to the production of specific …