BrainIAK: the brain imaging analysis kit

M Kumar, MJ Anderson, JW Antony… - Aperture …, 2022 - pmc.ncbi.nlm.nih.gov
Functional magnetic resonance imaging (fMRI) offers a rich source of data for studying the
neural basis of cognition. Here, we describe the Brain Imaging Analysis Kit (BrainIAK), an …

[HTML][HTML] Incorporating structured assumptions with probabilistic graphical models in fMRI data analysis

MB Cai, M Shvartsman, A Wu, H Zhang, X Zhu - Neuropsychologia, 2020 - Elsevier
With the wide adoption of functional magnetic resonance imaging (fMRI) by cognitive
neuroscience researchers, large volumes of brain imaging data have been accumulated in …

Gaussian process linking functions for mind, brain, and behavior

G Bahg, DG Evans, M Galdo… - Proceedings of the …, 2020 - National Acad Sciences
The link between mind, brain, and behavior has mystified philosophers and scientists for
millennia. Recent progress has been made by forming statistical associations between …

Enhanced hyperalignment via spatial prior information

A Andreella, L Finos, MA Lindquist - Human Brain Map**, 2023 - Wiley Online Library
Functional alignment between subjects is an important assumption of functional magnetic
resonance imaging (fMRI) group‐level analysis. However, it is often violated in practice …

Efficient hierarchical Bayesian inference for spatio-temporal regression models in neuroimaging

A Hashemi, Y Gao, C Cai, S Ghosh… - Advances in …, 2021 - proceedings.neurips.cc
Several problems in neuroimaging and beyond require inference on the parameters of multi-
task sparse hierarchical regression models. Examples include M/EEG inverse problems …

Differential network knockoff filter with application to brain connectivity analysis

J Ji, Z Hou, Y He, L Liu, F Xue, H Chen… - Statistics in …, 2024 - Wiley Online Library
The brain functional connectivity can typically be represented as a brain functional network,
where nodes represent regions of interest (ROIs) and edges symbolize their connections …