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Weisfeiler and leman go loopy: A new hierarchy for graph representational learning
We introduce $ r $-loopy Weisfeiler-Leman ($ r $-$\ell $ WL), a novel hierarchy of graph
isomorphism tests and a corresponding GNN framework, $ r $-$\ell $ MPNN, that can count …
isomorphism tests and a corresponding GNN framework, $ r $-$\ell $ MPNN, that can count …
Graph positional encoding via random feature propagation
Two main families of node feature augmentation schemes have been explored for
enhancing GNNs: random features and spectral positional encoding. Surprisingly, however …
enhancing GNNs: random features and spectral positional encoding. Surprisingly, however …
On the expressive power of spectral invariant graph neural networks
Incorporating spectral information to enhance Graph Neural Networks (GNNs) has shown
promising results but raises a fundamental challenge due to the inherent ambiguity of …
promising results but raises a fundamental challenge due to the inherent ambiguity of …
Swallowing the bitter pill: Simplified scalable conformer generation
We present a novel way to predict molecular conformers through a simple formulation that
sidesteps many of the heuristics of prior works and achieves state of the art results by using …
sidesteps many of the heuristics of prior works and achieves state of the art results by using …
Generating molecular conformer fields
In this paper we tackle the problem of generating conformers of a molecule in 3D space
given its molecular graph. We parameterize these conformers as continuous functions that …
given its molecular graph. We parameterize these conformers as continuous functions that …
Manifold diffusion fields
We present Manifold Diffusion Fields (MDF), an approach that unlocks learning of diffusion
models of data in general non-Euclidean geometries. Leveraging insights from spectral …
models of data in general non-Euclidean geometries. Leveraging insights from spectral …
Improving graph matching with positional reconstruction encoder-decoder network
Deriving from image matching and understanding, semantic keypoint matching aims at
establishing correspondence between keypoint sets in images. As graphs are powerful tools …
establishing correspondence between keypoint sets in images. As graphs are powerful tools …
Motif-driven molecular graph representation learning
R Wang, Y Ma, X Liu, Z **ng, Y Shen - Expert Systems with Applications, 2025 - Elsevier
Abstract Graph Neural Networks (GNNs) have emerged as powerful tools for molecular
graph analysis. Subgraph-based GNNs focus on learning high-level local patterns beyond …
graph analysis. Subgraph-based GNNs focus on learning high-level local patterns beyond …
Morphology generalizable reinforcement learning via multi-level graph features
Controlling a group of robots with diverse morphologies using a unified policy, known as
morphology generalizable control, is a challenging problem in robotic control. Existing graph …
morphology generalizable control, is a challenging problem in robotic control. Existing graph …
PGTransNet: a physics-guided transformer network for 3D ocean temperature and salinity predicting in tropical Pacific
S Wu, S Bao, W Dong, S Wang, X Zhang… - Frontiers in Marine …, 2024 - frontiersin.org
Accurately predicting the spatio-temporal evolution trends and long-term dynamics of three-
dimensional ocean temperature and salinity plays a crucial role in monitoring climate system …
dimensional ocean temperature and salinity plays a crucial role in monitoring climate system …