Computational deconvolution of transcriptomics data from mixed cell populations

F Avila Cobos, J Vandesompele, P Mestdagh… - …, 2018 - academic.oup.com
Gene expression analyses of bulk tissues often ignore cell type composition as an important
confounding factor, resulting in a loss of signal from lowly abundant cell types. In this review …

A review of methods for capacity identification in Choquet integral based multi-attribute utility theory: Applications of the Kappalab R package

M Grabisch, I Kojadinovic, P Meyer - European journal of operational …, 2008 - Elsevier
The application of multi-attribute utility theory whose aggregation process is based on the
Choquet integral requires the prior identification of a capacity. The main approaches to …

MIMO capacity characterization for movable antenna systems

W Ma, L Zhu, R Zhang - IEEE Transactions on Wireless …, 2023 - ieeexplore.ieee.org
In this paper, we propose a new multiple-input multiple-output (MIMO) communication
system with movable antennas (MAs) to exploit the antenna position optimization for …

Robust decomposition of cell type mixtures in spatial transcriptomics

DM Cable, E Murray, LS Zou, A Goeva… - Nature …, 2022 - nature.com
A limitation of spatial transcriptomics technologies is that individual measurements may
contain contributions from multiple cells, hindering the discovery of cell-type-specific spatial …

Inactivation of CDK12 delineates a distinct immunogenic class of advanced prostate cancer

YM Wu, M Cieślik, RJ Lonigro, P Vats, MA Reimers… - Cell, 2018 - cell.com
Using integrative genomic analysis of 360 metastatic castration-resistant prostate cancer
(mCRPC) samples, we identified a novel subtype of prostate cancer typified by biallelic loss …

Forecasting inflation in a data-rich environment: the benefits of machine learning methods

MC Medeiros, GFR Vasconcelos, Á Veiga… - Journal of Business & …, 2021 - Taylor & Francis
Inflation forecasting is an important but difficult task. Here, we explore advances in machine
learning (ML) methods and the availability of new datasets to forecast US inflation. Despite …

Secure MIMO communication relying on movable antennas

J Tang, C Pan, Y Zhang, H Ren… - IEEE Transactions on …, 2024 - ieeexplore.ieee.org
This paper considers a movable antenna (MA)-aided secure multiple-input multiple-output
(MIMO) communication system consisting of a base station (BS), a legitimate information …

Cell type-specific inference of differential expression in spatial transcriptomics

DM Cable, E Murray, V Shanmugam, S Zhang… - Nature …, 2022 - nature.com
A central problem in spatial transcriptomics is detecting differentially expressed (DE) genes
within cell types across tissue context. Challenges to learning DE include changing cell type …

[PDF][PDF] phytools: an R package for phylogenetic comparative biology (and other things)

LJ Revell - Methods in ecology and evolution, 2012 - drive.google.com
phytools: an R package for phylogenetic comparative biology (and other things) Page 1
APPLICATION phytools: an R package for phylogenetic comparative biology (and other things) …

A general Monte Carlo method for sample size analysis in the context of network models.

MA Constantin, NK Schuurman… - Psychological …, 2023 - psycnet.apa.org
We introduce a general method for sample size computations in the context of cross-
sectional network models. The method takes the form of an automated Monte Carlo …