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The rebirth of culture in microbiology through the example of culturomics to study human gut microbiota
JC Lagier, P Hugon, S Khelaifia… - Clinical microbiology …, 2015 - journals.asm.org
Bacterial culture was the first method used to describe the human microbiota, but this
method is considered outdated by many researchers. Metagenomics studies have since …
method is considered outdated by many researchers. Metagenomics studies have since …
Present and future of culturing bacteria
J Overmann, B Abt, J Sikorski - Annual review of microbiology, 2017 - annualreviews.org
The cultivation of bacteria is highly biased toward a few phylogenetic groups. Many of the
currently underexplored bacterial lineages likely have novel biosynthetic pathways and …
currently underexplored bacterial lineages likely have novel biosynthetic pathways and …
Soil properties influence bacterial abundance and diversity under different land-use regimes in semi-arid environments
Bacterial diversity is known to be a driver of soil ecosystem services and it is influenced by
the natural integrity of the environments. Samples from garden soil, saline soil and sludge …
the natural integrity of the environments. Samples from garden soil, saline soil and sludge …
[Књига][B] Modern soil microbiology
JD Van Elsas, JT Trevors, JK Jansson, P Nannipieri - 2006 - taylorfrancis.com
In the ten years since the publication of Modern Soil Microbiology, the study of soil
microbiology has significantly changed, both in the understanding of the diversity and …
microbiology has significantly changed, both in the understanding of the diversity and …
Cultivation and functional characterization of 79 planctomycetes uncovers their unique biology
When it comes to the discovery and analysis of yet uncharted bacterial traits, pure cultures
are essential as only these allow detailed morphological and physiological characterization …
are essential as only these allow detailed morphological and physiological characterization …
Planctomycetes as host-associated bacteria: a perspective that holds promise for their future isolations, by mimicking their native environmental niches in clinical …
OD Kaboré, S Godreuil, M Drancourt - Frontiers in Cellular and …, 2020 - frontiersin.org
Traditionally recognized as environmental bacteria, Planctomycetes have just been linked
recently to human pathology as opportunistic pathogens, arousing a great interest for clinical …
recently to human pathology as opportunistic pathogens, arousing a great interest for clinical …
Uncovering microbiomes of the rice phyllosphere using long-read metagenomic sequencing
S Masuda, P Gan, Y Kiguchi, M Anda, K Sasaki… - Communications …, 2024 - nature.com
The plant microbiome is crucial for plant growth, yet many important questions remain, such
as the identification of specific bacterial species in plants, their genetic content, and location …
as the identification of specific bacterial species in plants, their genetic content, and location …
Sustained bauxite residue rehabilitation with gypsum and organic matter 16 years after initial treatment
Bauxite residue is a high volume byproduct of alumina manufacture which is commonly
disposed of in purpose-built bauxite residue disposal areas (BRDAs). Natural waters …
disposed of in purpose-built bauxite residue disposal areas (BRDAs). Natural waters …
The Planctomycetia: an overview of the currently largest class within the phylum Planctomycetes
The phylum Planctomycetes comprises bacteria with uncommon features among
prokaryotes, such as cell division by budding, absence of the bacterial tubulin-homolog cell …
prokaryotes, such as cell division by budding, absence of the bacterial tubulin-homolog cell …
Niche-directed evolution modulates genome architecture in freshwater Planctomycetes
Freshwater environments teem with microbes that do not have counterparts in culture
collections or genetic data available in genomic repositories. Currently, our apprehension of …
collections or genetic data available in genomic repositories. Currently, our apprehension of …