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Interaction dynamics of intrinsically disordered proteins from single-molecule spectroscopy
Many proteins contain large structurally disordered regions or are entirely disordered under
physiological conditions. The functions of these intrinsically disordered proteins (IDPs) often …
physiological conditions. The functions of these intrinsically disordered proteins (IDPs) often …
New Insights into the Cooperativity and Dynamics of Dimeric Enzymes
KW Chen, TY Sun, YD Wu - Chemical Reviews, 2023 - ACS Publications
A survey of protein databases indicates that the majority of enzymes exist in oligomeric
forms, with about half of those found in the UniProt database being homodimeric …
forms, with about half of those found in the UniProt database being homodimeric …
Fluorescence resonance energy transfer at the single-molecule level
Fluorescence resonance energy transfer (FRET) is a powerful spectroscopic method for
measuring distances in the 2–8 nm range. Often, conformational changes and molecular …
measuring distances in the 2–8 nm range. Often, conformational changes and molecular …
Heterogeneity in protein folding and unfolding reactions
Proteins have dynamic structures that undergo chain motions on time scales spanning from
picoseconds to seconds. Resolving the resultant conformational heterogeneity is essential …
picoseconds to seconds. Resolving the resultant conformational heterogeneity is essential …
FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices
Single-molecule FRET (smFRET) has become a mainstream technique for studying
biomolecular structural dynamics. The rapid and wide adoption of smFRET experiments by …
biomolecular structural dynamics. The rapid and wide adoption of smFRET experiments by …
Unveiling invisible protein states with NMR spectroscopy
Highlights•Sparsely populated protein states can play significant biological roles.•NMR
spectroscopy can structurally and dynamically characterize 'invisible'protein states.•We …
spectroscopy can structurally and dynamically characterize 'invisible'protein states.•We …
Single-molecule FRET for probing nanoscale biomolecular dynamics
Single-molecule spectroscopy is a powerful method for studying the physics of molecular
systems, particularly biomolecules, such as proteins and nucleic acids. By avoiding …
systems, particularly biomolecules, such as proteins and nucleic acids. By avoiding …
Milestoning estimators of dissipation in systems observed at a coarse resolution
Many nonequilibrium, active processes are observed at a coarse-grained level, where
different microscopic configurations are projected onto the same observable state. Such …
different microscopic configurations are projected onto the same observable state. Such …
Transition path times of coupled folding and binding reveal the formation of an encounter complex
The association of biomolecules is the elementary event of communication in biology. Most
mechanistic information of how the interactions between binding partners form or break is …
mechanistic information of how the interactions between binding partners form or break is …
Robust membrane protein tweezers reveal the folding speed limit of helical membrane proteins
S Kim, D Lee, WCB Wijesinghe, D Min - Elife, 2023 - elifesciences.org
Single-molecule tweezers, such as magnetic tweezers, are powerful tools for probing nm-
scale structural changes in single membrane proteins under force. However, the weak …
scale structural changes in single membrane proteins under force. However, the weak …