Gene duplication as a mechanism of genomic adaptation to a changing environment

FA Kondrashov - Proceedings of the Royal Society B …, 2012 - royalsocietypublishing.org
A subject of extensive study in evolutionary theory has been the issue of how neutral,
redundant copies can be maintained in the genome for long periods of time. Concurrently …

The evolution of gene duplications: classifying and distinguishing between models

H Innan, F Kondrashov - Nature Reviews Genetics, 2010 - nature.com
Gene duplications and their subsequent divergence play an important part in the evolution
of novel gene functions. Several models for the emergence, maintenance and evolution of …

Polyploidy can drive rapid adaptation in yeast

AM Selmecki, YE Maruvka, PA Richmond, M Guillet… - Nature, 2015 - nature.com
Polyploidy is observed across the tree of life, yet its influence on evolution remains
incompletely understood,,,. Polyploidy, usually whole-genome duplication, is proposed to …

Turning a hobby into a job: how duplicated genes find new functions

GC Conant, KH Wolfe - Nature Reviews Genetics, 2008 - nature.com
Gene duplication provides raw material for functional innovation. Recent advances have
shed light on two fundamental questions regarding gene duplication: which genes tend to …

Genome evolution in yeasts

B Dujon, D Sherman, G Fischer, P Durrens… - Nature, 2004 - nature.com
Identifying the mechanisms of eukaryotic genome evolution by comparative genomics is
often complicated by the multiplicity of events that have taken place throughout the history of …

Shifts in growth strategies reflect tradeoffs in cellular economics

D Molenaar, R Van Berlo, D De Ridder… - Molecular systems …, 2009 - embopress.org
The growth rate‐dependent regulation of cell size, ribosomal content, and metabolic
efficiency follows a common pattern in unicellular organisms: with increasing growth rates …

Extrachromosomal circular DNA is common in yeast

HD Møller, L Parsons, TS Jørgensen, D Botstein… - Proceedings of the …, 2015 - pnas.org
Examples of extrachromosomal circular DNAs (eccDNAs) are found in many organisms, but
their impact on genetic variation at the genome scale has not been investigated. We …

The origin of new genes: glimpses from the young and old

M Long, E Betrán, K Thornton, W Wang - Nature Reviews Genetics, 2003 - nature.com
Genome data have revealed great variation in the numbers of genes in different organisms,
which indicates that there is a fundamental process of genome evolution: the origin of new …

[HTML][HTML] Gene copy-number alterations: a cost-benefit analysis

YC Tang, A Amon - Cell, 2013 - cell.com
Changes in DNA copy number, whether confined to specific genes or affecting whole
chromosomes, have been identified as causes of diseases and developmental …

Selection in the evolution of gene duplications

FA Kondrashov, IB Rogozin, YI Wolf, EV Koonin - Genome biology, 2002 - Springer
Background Gene duplications have a major role in the evolution of new biological
functions. Theoretical studies often assume that a duplication per se is selectively neutral …