[HTML][HTML] Data-analysis strategies for image-based cell profiling
Image-based cell profiling is a high-throughput strategy for the quantification of phenotypic
differences among a variety of cell populations. It paves the way to studying biological …
differences among a variety of cell populations. It paves the way to studying biological …
Practical considerations for quantitative light sheet fluorescence microscopy
Fluorescence microscopy has evolved from a purely observational tool to a platform for
quantitative, hypothesis-driven research. As such, the demand for faster and less phototoxic …
quantitative, hypothesis-driven research. As such, the demand for faster and less phototoxic …
A BaSiC tool for background and shading correction of optical microscopy images
Quantitative analysis of bioimaging data is often skewed by both shading in space and
background variation in time. We introduce BaSiC, an image correction method based on …
background variation in time. We introduce BaSiC, an image correction method based on …
A review of methods for correction of intensity inhomogeneity in MRI
U Vovk, F Pernus, B Likar - IEEE transactions on medical …, 2007 - ieeexplore.ieee.org
Medical image acquisition devices provide a vast amount of anatomical and functional
information, which facilitate and improve diagnosis and patient treatment, especially when …
information, which facilitate and improve diagnosis and patient treatment, especially when …
Retrospective correction of MR intensity inhomogeneity by information minimization
B Likar, MA Viergever, F Pernus - IEEE transactions on medical …, 2001 - ieeexplore.ieee.org
In this paper, the problem of retrospective correction of intensity inhomogeneity in magnetic
resonance (MR) images is addressed. A novel model-based correction method is proposed …
resonance (MR) images is addressed. A novel model-based correction method is proposed …
A review on MR image intensity inhomogeneity correction
Z Hou - International journal of biomedical imaging, 2006 - Wiley Online Library
Intensity inhomogeneity (IIH) is often encountered in MR imaging, and a number of
techniques have been devised to correct this artifact. This paper attempts to review some of …
techniques have been devised to correct this artifact. This paper attempts to review some of …
A hierarchical approach to elastic registration based on mutual information
B Likar, F Pernuš - Image and vision computing, 2001 - Elsevier
A hierarchical approach to elastic registration based on mutual information, in which the
images are progressively subdivided, locally registered, and elastically interpolated, is …
images are progressively subdivided, locally registered, and elastically interpolated, is …
Correction of uneven illumination (vignetting) in digital microscopy images
FJWM Leong, M Brady, JOD McGee - Journal of clinical pathology, 2003 - jcp.bmj.com
Background: Many digital microscopy images suffer from poor illumination at the peripheries
(vignetting), often attributable to factors related to the light path between the camera and the …
(vignetting), often attributable to factors related to the light path between the camera and the …
The role of bioinformatics in two‐dimensional gel electrophoresis
AW Dowsey, MJ Dunn, GZ Yang - PROTEOMICS: International …, 2003 - Wiley Online Library
Over the last two decades, two‐dimensional electrophoresis (2‐DE) gel has established
itself as the de facto approach to separating proteins from cell and tissue samples. Due to …
itself as the de facto approach to separating proteins from cell and tissue samples. Due to …
Pipeline for illumination correction of images for high‐throughput microscopy
The presence of systematic noise in images in high‐throughput microscopy experiments can
significantly impact the accuracy of downstream results. Among the most common sources of …
significantly impact the accuracy of downstream results. Among the most common sources of …