DK Barupal, O Fiehn - Scientific reports, 2017 - nature.com
Metabolomics answers a fundamental question in biology: How does metabolism respond to
genetic, environmental or phenotypic perturbations? Combining several metabolomics …

Rise of deep learning for genomic, proteomic, and metabolomic data integration in precision medicine

D Grapov, J Fahrmann, K Wanichthanarak… - Omics: a journal of …, 2018 - liebertpub.com
Abstract Machine learning (ML) is being ubiquitously incorporated into everyday products
such as Internet search, email spam filters, product recommendations, image classification …

[HTML][HTML] Computational approaches in target identification and drug discovery

T Katsila, GA Spyroulias, GP Patrinos… - Computational and …, 2016 - Elsevier
In the big data era, voluminous datasets are routinely acquired, stored and analyzed with the
aim to inform biomedical discoveries and validate hypotheses. No doubt, data volume and …

Metabolomics: small molecules that matter more

BC Muthubharathi, T Gowripriya, K Balamurugan - Molecular omics, 2021 - pubs.rsc.org
Metabolomics, an analytical study with high-throughput profiling, helps to understand
interactions within a biological system. Small molecules, called metabolites or metabolomes …

Plants metabolome study: Emerging tools and techniques

MK Patel, S Pandey, M Kumar, MI Haque, S Pal… - Plants, 2021 - mdpi.com
Metabolomics is now considered a wide-ranging, sensitive and practical approach to
acquire useful information on the composition of a metabolite pool present in any organism …

Integrated omics analysis of specialized metabolism in medicinal plants

A Rai, K Saito, M Yamazaki - The Plant Journal, 2017 - Wiley Online Library
Medicinal plants are a rich source of highly diverse specialized metabolites with important
pharmacological properties. Until recently, plant biologists were limited in their ability to …

Sparse network modeling and metscape-based visualization methods for the analysis of large-scale metabolomics data

S Basu, W Duren, CR Evans, CF Burant… - …, 2017 - academic.oup.com
Motivation Recent technological advances in mass spectrometry, development of richer
mass spectral libraries and data processing tools have enabled large scale metabolic …

Global chemical analysis of biology by mass spectrometry

AA Aksenov, R da Silva, R Knight, NP Lopes… - Nature Reviews …, 2017 - nature.com
Mass spectrometry instruments measure the mass to charge ratio of ions, from which we
infer the molecular structures. They are key tools for investigating the incredibly diverse …