Interrogating biological systems using visible-light-powered catalysis

KA Ryu, CM Kaszuba, NB Bissonnette… - Nature Reviews …, 2021 - nature.com
Light-powered catalysis has found broad utility as a chemical transformation strategy, with
widespread impact on energy, environment, drug discovery and human health. A noteworthy …

Sequence specific DNA cross-linking triggered by visible light

M Op de Beeck, A Madder - Journal of the American Chemical …, 2012 - ACS Publications
A new biocompatible strategy for photoinduced DNA interstrand cross-linking is presented.
Methylene blue induced 1O2 formation triggers furan oxidation; the resulting aldehyde then …

Photocatalysis in Chemical Biology: Extending the Scope of Optochemical Control and Towards New Frontiers in Semisynthetic Bioconjugates and Biocatalysis

W Liu, EE Watson, N Winssinger - Helvetica Chimica Acta, 2021 - Wiley Online Library
Biomedical research has been empowered by tools that enable spatial and temporal control
of biological systems. These have predominantly come from photocaged bioactive …

Furan oxidation based cross-linking: a new approach for the study and targeting of nucleic acid and protein interactions

LLG Carrette, E Gyssels, N De Laet… - Chemical …, 2016 - pubs.rsc.org
Furan mediated nucleic acid cross-linking, initially developed for DNA interstrand duplex
cross-linking, has matured into a versatile tool for the study of protein and nucleic acid …

Locking up G‐Quadruplexes with Light‐Triggered Staples Leads to Increased Topological, Thermodynamic, and Metabolic Stability

J Barr, E Cadoni, S Schellinck… - Angewandte Chemie …, 2024 - Wiley Online Library
Abstract G‐quadruplexes (G4 s) are secondary, tetraplexed DNA structures abundant in non‐
coding regions of the genome, implicated in gene transcription processes and currently …

Structural Basis of Furan–Amino Acid Recognition by a Polyspecific Aminoacyl‐tRNA‐Synthetase and its Genetic Encoding in Human Cells

MJ Schmidt, A Weber, M Pott, W Welte… - …, 2014 - Wiley Online Library
The site‐selective introduction of photo‐crosslinking groups into proteins enables the
discovery and map** of weak and/or transient protein interactions with high …

Cross-linked DNA: Site-selective “click” ligation in duplexes with bis-azides and stability changes caused by internal cross-links

H **ong, F Seela - Bioconjugate Chemistry, 2012 - ACS Publications
Heterodimeric interstrand cross-linked DNA was constructed by the “bis-click” reaction
carried out on preformed oligonucleotide duplexes with the bis-azide 1. For this, alkynylated …

A mildly inducible and selective cross-link methodology for RNA duplexes

LLG Carrette, E Gyssels, J Loncke… - Organic & Biomolecular …, 2014 - pubs.rsc.org
We here report on the furan oxidation methodology for interstrand cross-linking of RNA
duplexes, which have a different structure and are more stiff, reactive and labile than their …

Furan-based (photo) oxidation reactions and their application in nucleic acid and protein targeting

J Barr, G Colpaert, E Cadoni, A Madder - Methods, 2023 - Elsevier
Oligonucleotides (ODNs) find applications as diagnostic and therapeutic tools due to their
unique ability to interact, thanks to Watson-Crick base pairing, with a specific DNA or RNA …

Phosphazenes

FF Stewart - 2015 - books.rsc.org
Phosphazene chemistry continues to expand in its breadth and application. This article
discusses new research published in 2013 covering mono-and dimeric structures …