Insect mitochondrial genomics: A decade of progress

SL Cameron - Annual Review of Entomology, 2024 - annualreviews.org
The past decade has seen the availability of insect genomic data explode, with
mitochondrial (mt) genome data seeing the greatest growth. The widespread adoption of …

Translating genomic advances into biodiversity conservation

CJ Hogg - Nature Reviews Genetics, 2024 - nature.com
A key action of the new Global Biodiversity Framework is the maintenance of genetic
diversity in all species to safeguard their adaptive potential. To achieve this goal, a …

Scalable, accessible and reproducible reference genome assembly and evaluation in Galaxy

D Larivière, L Abueg, N Brajuka, C Gallardo-Alba… - Nature …, 2024 - nature.com
The Earth BioGenome Project aims to produce reference genomes for all~ 1.8 million known
eukaryotic species over the next decade 1–4. Achieving this goal will require the current …

Ancient diversity in host-parasite interaction genes in a model parasitic nematode

L Stevens, I Martínez-Ugalde, E King, M Wagah… - Nature …, 2023 - nature.com
Host-parasite interactions exert strong selection pressures on the genomes of both host and
parasite. These interactions can lead to negative frequency-dependent selection, a form of …

PMAT: an efficient plant mitogenome assembly toolkit using low-coverage HiFi sequencing data

C Bi, F Shen, F Han, Y Qu, J Hou, K Xu, L Xu… - Horticulture …, 2024 - academic.oup.com
Complete mitochondrial genomes (mitogenomes) of plants are valuable resources for
nucleocytoplasmic interactions, plant evolution, and plant cytoplasmic male sterile line …

[PDF][PDF] TIPPo: A User-Friendly Tool for De Novo Assembly of Organellar Genomes with High-Fidelity Data

W **an, I Bezrukov, Z Bao, S Vorbrugg… - Molecular Biology …, 2025 - academic.oup.com
Plant cells have two major organelles with their own genomes: chloroplasts and
mitochondria. While chloroplast genomes tend to be structurally conserved, the …

Swordtail fish hybrids reveal that genome evolution is surprisingly predictable after initial hybridization

QK Langdon, JS Groh, SM Aguillon, DL Powell… - PLoS …, 2024 - journals.plos.org
Over the past 2 decades, biologists have come to appreciate that hybridization, or genetic
exchange between distinct lineages, is remarkably common—not just in particular lineages …

Genomic resources of aquatic Lepidoptera, Elophila obliteralis and Hyposmocoma kahamanoa, reveal similarities with Trichoptera in amino acid composition of …

J Heckenhauer, D Plotkin, JI Martinez… - G3: Genes …, 2024 - academic.oup.com
While most species of butterflies and moths (Lepidoptera) have entirely terrestrial life
histories,∼ 0.5% of the described species are known to have an aquatic larval stage. Larvae …

The genome sequence of the giant clam, Tridacna gigas (Linnaeus, 1758)

R Li, J Li, JV Lopez, G Oatley… - Wellcome Open …, 2024 - pmc.ncbi.nlm.nih.gov
We present a chromosomal-level genome assembly from an individual Tridacna gigas (the
giant clam; Mollusca; Bivalvia; Veneroida; Cardiidae). The genome sequence is 1,175.9 …

A chromosome-level assembly supports genome-wide investigation of the DMRT gene family in the golden mussel (Limnoperna fortunei)

JG RN Ferreira, J A. Americo, D LAS do Amaral… - …, 2023 - academic.oup.com
Abstract Background The golden mussel (Limnoperna fortunei) is a highly invasive species
that causes environmental and socioeconomic losses in invaded areas. Reference …