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Genetic circuit design automation with Cello 2.0
Cells interact with their environment, communicate among themselves, track time and make
decisions through functions controlled by natural regulatory genetic circuits consisting of …
decisions through functions controlled by natural regulatory genetic circuits consisting of …
[HTML][HTML] New synthetic biology tools for metabolic control
In industrial bioprocesses, microbial metabolism dictates the product yields, and therefore,
our capacity to control it has an enormous potential to help us move towards a bio-based …
our capacity to control it has an enormous potential to help us move towards a bio-based …
Systematic mining of the human microbiome identifies antimicrobial peptides with diverse activity spectra
Human-associated bacteria secrete modified peptides to control host physiology and
remodel the microbiota species composition. Here we scanned 2,229 Human Microbiome …
remodel the microbiota species composition. Here we scanned 2,229 Human Microbiome …
Genetic circuit design automation for yeast
Cells can be programmed to monitor and react to their environment using genetic circuits.
Design automation software maps a desired circuit function to a DNA sequence, a process …
Design automation software maps a desired circuit function to a DNA sequence, a process …
Partitioning of a 2-bit hash function across 66 communicating cells
JP Padmakumar, JJ Sun, W Cho, Y Zhou… - Nature Chemical …, 2024 - nature.com
Powerful distributed computing can be achieved by communicating cells that individually
perform simple operations. Here, we report design software to divide a large genetic circuit …
perform simple operations. Here, we report design software to divide a large genetic circuit …
4-bit adhesion logic enables universal multicellular interface patterning
Multicellular systems, from bacterial biofilms to human organs, form interfaces (or
boundaries) between different cell collectives to spatially organize versatile functions,. The …
boundaries) between different cell collectives to spatially organize versatile functions,. The …
Designing biological circuits: synthetic biology within the operon model and beyond
In 1961, Jacob and Monod proposed the operon model of gene regulation. At the model's
core was the modular assembly of regulators, operators, and structural genes. To illustrate …
core was the modular assembly of regulators, operators, and structural genes. To illustrate …
Cellular checkpoint control using programmable sequential logic
INTRODUCTION Modern computing is based on sequential logic, in which the state of a
circuit depends both on the present inputs as well as the input history (memory) …
circuit depends both on the present inputs as well as the input history (memory) …
[PDF][PDF] Living electronics: A catalogue of engineered living electronic components
Biology leverages a range of electrical phenomena to extract and store energy, control
molecular reactions and enable multicellular communication. Microbes, in particular, have …
molecular reactions and enable multicellular communication. Microbes, in particular, have …
Redesign of an Escherichia coli Nissle treatment for phenylketonuria using insulated genomic landing pads and genetic circuits to reduce burden
To build therapeutic strains, Escherichia coli Nissle (EcN) have been engineered to express
antibiotics, toxin-degrading enzymes, immunoregulators, and anti-cancer chemotherapies …
antibiotics, toxin-degrading enzymes, immunoregulators, and anti-cancer chemotherapies …