Diversity in Genetic In Vivo Methods for Protein-Protein Interaction Studies: from the Yeast Two-Hybrid System to the Mammalian Split-Luciferase System

B Stynen, H Tournu, J Tavernier… - … and molecular biology …, 2012 - journals.asm.org
The yeast two-hybrid system pioneered the field of in vivo protein-protein interaction
methods and undisputedly gave rise to a palette of ingenious techniques that are constantly …

Analyzing protein–protein interaction networks

GCKW Koh, P Porras, B Aranda… - Journal of proteome …, 2012 - ACS Publications
The advent of the “omics” era in biology research has brought new challenges and requires
the development of novel strategies to answer previously intractable questions. Molecular …

[HTML][HTML] An atlas of combinatorial transcriptional regulation in mouse and man

T Ravasi, H Suzuki, CV Cannistraci, S Katayama… - Cell, 2010 - cell.com
Combinatorial interactions among transcription factors are critical to directing tissue-specific
gene expression. To build a global atlas of these combinations, we have screened for …

Comprehensive interaction map of the Arabidopsis MADS box transcription factors

S de Folter, RGH Immink, M Kieffer, L Parenicova… - The Plant …, 2005 - academic.oup.com
Interactions between proteins are essential for their functioning and the biological processes
they control. The elucidation of interaction maps based on yeast studies is a first step toward …

Online predicted human interaction database

KR Brown, I Jurisica - Bioinformatics, 2005 - academic.oup.com
Motivation: High-throughput experiments are being performed at an ever-increasing rate to
systematically elucidate protein–protein interaction (PPI) networks for model organisms …

The ubiquitin ligase Riplet is essential for RIG-I-dependent innate immune responses to RNA virus infection

H Oshiumi, M Miyashita, N Inoue, M Okabe… - Cell host & …, 2010 - cell.com
RNA virus infection is recognized by the RIG-I-like receptors RIG-I and MDA5, which induce
antiviral responses including the production of type I interferons (IFNs) and proinflammatory …

Thyroid hormone receptor interacting protein 13 (TRIP13) AAA-ATPase is a novel mitotic checkpoint-silencing protein

K Wang, B Sturt-Gillespie, JC Hittle, D Macdonald… - Journal of Biological …, 2014 - jbc.org
The mitotic checkpoint (or spindle assembly checkpoint) is a fail-safe mechanism to prevent
chromosome missegregation by delaying anaphase onset in the presence of defective …

Comparative genomics of Physcomitrella patens gametophytic transcriptome and Arabidopsis thaliana: Implication for land plant evolution

T Nishiyama, T Fujita, T Shin-I, M Seki… - Proceedings of the …, 2003 - pnas.org
The mosses and flowering plants diverged> 400 million years ago. The mosses have
haploid-dominant life cycles, whereas the flowering plants are diploid-dominant. The …

Integrative annotation of 21,037 human genes validated by full-length cDNA clones

T Imanishi, T Itoh, Y Suzuki, C O'donovan… - PLoS …, 2004 - journals.plos.org
The human genome sequence defines our inherent biological potential; the realization of
the biology encoded therein requires knowledge of the function of each gene. Currently, our …

[HTML][HTML] Identification of protein interactions involved in cellular signaling

J Westermarck, J Ivaska, GL Corthals - Molecular & Cellular Proteomics, 2013 - Elsevier
Protein-protein interactions drive biological processes. They are critical for all intra-and
extracellular functions, and the technologies to analyze them are widely applied throughout …