Common pitfalls in drug target Mendelian randomization and how to avoid them

D Gill, MJ Dib, HT Cronjé, V Karhunen, B Woolf… - BMC medicine, 2024 - Springer
Abstract Background Drug target Mendelian randomization describes the use of genetic
variants as instrumental variables for studying the effects of pharmacological agents. The …

Variants in tubule epithelial regulatory elements mediate most heritable differences in human kidney function

GB Loeb, P Kathail, RW Shuai, R Chung, RJ Grona… - Nature Genetics, 2024 - nature.com
Kidney failure, the decrease of kidney function below a threshold necessary to support life, is
a major cause of morbidity and mortality. We performed a genome-wide association study …

Targeting DNA methylation in diabetic kidney disease: A new perspective

V Akhouri, S Majumder, AB Gaikwad - Life Sciences, 2023 - Elsevier
Diabetic kidney disease (DKD) is a leading diabetic complication causing significant
mortality among people around the globe. People with poor glycemic control accompanied …

DNA methylation markers for kidney function and progression of diabetic kidney disease

KY Li, CHT Tam, H Liu, S Day, CKP Lim, WY So… - Nature …, 2023 - nature.com
Epigenetic markers are potential biomarkers for diabetes and related complications. Using a
prospective cohort from the Hong Kong Diabetes Register, we perform two independent …

Transcriptome-and proteome-wide association studies nominate determinants of kidney function and damage

P Schlosser, J Zhang, H Liu, AL Surapaneni, EP Rhee… - Genome biology, 2023 - Springer
Background The pathophysiological causes of kidney disease are not fully understood. Here
we show that the integration of genome-wide genetic, transcriptomic, and proteomic …

The Rotterdam Study. Design update and major findings between 2020 and 2024

MA Ikram, BCT Kieboom, WP Brouwer… - European Journal of …, 2024 - Springer
Abstract The Rotterdam Study is a population-based cohort study, started in 1990 in the
district of Ommoord in the city of Rotterdam, the Netherlands, with the aim to describe the …

A methylation risk score for chronic kidney disease: a HyperGEN study

AC Jones, A Patki, V Srinivasasainagendra… - Scientific reports, 2024 - nature.com
Chronic kidney disease (CKD) impacts about 1 in 7 adults in the United States, but African
Americans (AAs) carry a disproportionately higher burden of disease. Epigenetic …

Reduced methylation correlates with diabetic nephropathy risk in type 1 diabetes

I Khurana, H Kaipananickal, S Maxwell… - The Journal of …, 2023 - Am Soc Clin Investig
Diabetic nephropathy (DN) is a polygenic disorder with few risk variants showing robust
replication in large-scale genome-wide association studies. To understand the role of DNA …

Unraveling the epigenetic code: human kidney DNA methylation and chromatin dynamics in renal disease development

Y Yan, H Liu, A Abedini, X Sheng, M Palmer… - nature …, 2024 - nature.com
Epigenetic changes may fill a critical gap in our understanding of kidney disease
development, as they not only reflect metabolic changes but are also preserved and …

A comparison of the genes and genesets identified by GWAS and EWAS of fifteen complex traits

T Battram, TR Gaunt, CL Relton, NJ Timpson… - Nature …, 2022 - nature.com
Identifying genomic regions pertinent to complex traits is a common goal of genome-wide
and epigenome-wide association studies (GWAS and EWAS). GWAS identify causal genetic …