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Advances and opportunities in RNA structure experimental determination and computational modeling
Beyond transferring genetic information, RNAs are molecules with diverse functions that
include catalyzing biochemical reactions and regulating gene expression. Most of these …
include catalyzing biochemical reactions and regulating gene expression. Most of these …
Macromolecular modeling and design in Rosetta: recent methods and frameworks
The Rosetta software for macromolecular modeling, docking and design is extensively used
in laboratories worldwide. During two decades of development by a community of …
in laboratories worldwide. During two decades of development by a community of …
Structure of human telomerase holoenzyme with bound telomeric DNA
GE Ghanim, AJ Fountain, AMM Van Roon, R Rangan… - Nature, 2021 - nature.com
Telomerase adds telomeric repeats at chromosome ends to compensate for the telomere
loss that is caused by incomplete genome end replication. In humans, telomerase is …
loss that is caused by incomplete genome end replication. In humans, telomerase is …
Accelerated cryo-EM-guided determination of three-dimensional RNA-only structures
The discovery and design of biologically important RNA molecules is outpacing three-
dimensional structural characterization. Here, we demonstrate that cryo-electron microscopy …
dimensional structural characterization. Here, we demonstrate that cryo-electron microscopy …
Model building of protein complexes from intermediate-resolution cryo-EM maps with deep learning-guided automatic assembly
Advances in microscopy instruments and image processing algorithms have led to an
increasing number of cryo-electron microscopy (cryo-EM) maps. However, building accurate …
increasing number of cryo-electron microscopy (cryo-EM) maps. However, building accurate …
Structure, folding and flexibility of co-transcriptional RNA origami
RNA origami is a method for designing RNA nanostructures that can self-assemble through
co-transcriptional folding with applications in nanomedicine and synthetic biology. However …
co-transcriptional folding with applications in nanomedicine and synthetic biology. However …
Cryo-EM advances in RNA structure determination
Cryo-electron microscopy (cryo-EM) has emerged as an unprecedented tool to resolve
protein structures at atomic resolution. Structural insights of biological samples not …
protein structures at atomic resolution. Structural insights of biological samples not …
FARFAR2: improved de novo rosetta prediction of complex global RNA folds
Predicting RNA three-dimensional structures from sequence could accelerate
understanding of the growing number of RNA molecules being discovered across biology …
understanding of the growing number of RNA molecules being discovered across biology …
Cryo-EM structures of full-length Tetrahymena ribozyme at 3.1 Å resolution
Single-particle cryogenic electron microscopy (cryo-EM) has become a standard technique
for determining protein structures at atomic resolution,–. However, cryo-EM studies of protein …
for determining protein structures at atomic resolution,–. However, cryo-EM studies of protein …
A unified mechanism for intron and exon definition and back-splicing
The molecular mechanisms of exon definition and back-splicing are fundamental
unanswered questions in pre-mRNA splicing. Here we report cryo-electron microscopy …
unanswered questions in pre-mRNA splicing. Here we report cryo-electron microscopy …