Harnessing the power of RADseq for ecological and evolutionary genomics

KR Andrews, JM Good, MR Miller, G Luikart… - Nature Reviews …, 2016 - nature.com
High-throughput techniques based on restriction site-associated DNA sequencing (RADseq)
are enabling the low-cost discovery and genoty** of thousands of genetic markers for any …
[Free GPT-4]
JC Glaubitz, TM Casstevens, F Lu, J Harriman… - PloS one, 2014 - journals.plos.org
Genoty** by sequencing (GBS) is a next generation sequencing based method that takes
advantage of reduced representation to enable high throughput genoty** of large …

Genoty**‐by‐sequencing for plant breeding and genetics

JA Poland, TW Rife - The plant genome, 2012 - Wiley Online Library
Rapid advances in “next‐generation” DNA sequencing technology have brought the US
$1000 human (Homo sapiens) genome within reach while providing the raw sequencing …

Genomic determinants of coral heat tolerance across latitudes

GB Dixon, SW Davies, GV Aglyamova, E Meyer… - Science, 2015 - science.org
As global warming continues, reef-building corals could avoid local population declines
through “genetic rescue” involving exchange of heat-tolerant genotypes across latitudes, but …

Scallop genome provides insights into evolution of bilaterian karyotype and development

S Wang, J Zhang, W Jiao, JI Li, X Xun, Y Sun… - Nature ecology & …, 2017 - nature.com
Reconstructing the genomes of bilaterian ancestors is central to our understanding of animal
evolution, where knowledge from ancient and/or slow-evolving bilaterian lineages is critical …

Bulk segregation analysis in the NGS era: a review of its teenage years

Z Li, Y Xu - The Plant Journal, 2022 - Wiley Online Library
Bulk segregation analysis (BSA) utilizes a strategy of pooling individuals with extreme
phenotypes to conduct economical and rapidly linked marker screening or quantitative trait …

dDocent: a RADseq, variant-calling pipeline designed for population genomics of non-model organisms

JB Puritz, CM Hollenbeck, JR Gold - PeerJ, 2014 - peerj.com
Restriction-site associated DNA sequencing (RADseq) has become a powerful and useful
approach for population genomics. Currently, no software exists that utilizes both paired-end …