Cancer driver mutations: predictions and reality
Cancer cells accumulate many genetic alterations throughout their lifetime, but only a few of
them drive cancer progression, termed driver mutations. Driver mutations may vary between …
them drive cancer progression, termed driver mutations. Driver mutations may vary between …
Role of non-coding sequence variants in cancer
Patients with cancer carry somatic sequence variants in their tumour in addition to the
germline variants in their inherited genome. Although variants in protein-coding regions …
germline variants in their inherited genome. Although variants in protein-coding regions …
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes
The discovery of drivers of cancer has traditionally focused on protein-coding genes,,–. Here
we present analyses of driver point mutations and structural variants in non-coding regions …
we present analyses of driver point mutations and structural variants in non-coding regions …
Non-coding driver mutations in human cancer
Tumour formation involves random mutagenic events and positive evolutionary selection
acting on a subset of such events, referred to as driver mutations. A decade of careful …
acting on a subset of such events, referred to as driver mutations. A decade of careful …
Genome-wide analysis of somatic noncoding mutation patterns in cancer
We established a genome-wide compendium of somatic mutation events in 3949 whole
cancer genomes representing 19 tumor types. Protein-coding events captured well …
cancer genomes representing 19 tumor types. Protein-coding events captured well …
Recurrent and functional regulatory mutations in breast cancer
Genomic analysis of tumours has led to the identification of hundreds of cancer genes on the
basis of the presence of mutations in protein-coding regions. By contrast, much less is …
basis of the presence of mutations in protein-coding regions. By contrast, much less is …
OncodriveFML: a general framework to identify coding and non-coding regions with cancer driver mutations
Distinguishing the driver mutations from somatic mutations in a tumor genome is one of the
major challenges of cancer research. This challenge is more acute and far from solved for …
major challenges of cancer research. This challenge is more acute and far from solved for …
Comparative genomics provides etiologic and biological insight into melanoma subtypes
Melanoma is a cancer of melanocytes, with multiple subtypes based on body site location.
Cutaneous melanoma is associated with skin exposed to ultraviolet radiation; uveal …
Cutaneous melanoma is associated with skin exposed to ultraviolet radiation; uveal …
Genome-wide map** of somatic mutation rates uncovers drivers of cancer
Identification of cancer driver mutations that confer a proliferative advantage is central to
understanding cancer; however, searches have often been limited to protein-coding …
understanding cancer; however, searches have often been limited to protein-coding …
Whole-genome landscape of adult T-cell leukemia/lymphoma
Adult T-cell leukemia/lymphoma (ATL) is an aggressive neoplasm immunophenotypically
resembling regulatory T cells, associated with human T-cell leukemia virus type-1. Here, we …
resembling regulatory T cells, associated with human T-cell leukemia virus type-1. Here, we …