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A tutorial in small molecule identification via electrospray ionization‐mass spectrometry: The practical art of structural elucidation
The identification of unknown molecules has been one of the cornerstone applications of
mass spectrometry for decades. This tutorial reviews the basics of the interpretation of …
mass spectrometry for decades. This tutorial reviews the basics of the interpretation of …
Computational mass spectrometry for small molecules
The identification of small molecules from mass spectrometry (MS) data remains a major
challenge in the interpretation of MS data. This review covers the computational aspects of …
challenge in the interpretation of MS data. This review covers the computational aspects of …
Computational prediction of electron ionization mass spectra to assist in GC/MS compound identification
We describe a tool, competitive fragmentation modeling for electron ionization (CFM-EI) that,
given a chemical structure (eg, in SMILES or InChI format), computationally predicts an …
given a chemical structure (eg, in SMILES or InChI format), computationally predicts an …
The isotope distribution: A rose with thorns
J Claesen, A Rockwood, M Gorshkov… - Mass Spectrometry …, 2025 - Wiley Online Library
The isotope distribution, which reflects the number and probabilities of occurrence of
different isotopologues of a molecule, can be theoretically calculated. With the current …
different isotopologues of a molecule, can be theoretically calculated. With the current …
CORP: The use of deuterated water for the measurement of protein synthesis
The use of deuterium oxide (D2O) has greatly expanded the scope of what is possible for
the measurement of protein synthesis. The greatest asset of D2O labeling is that it facilitates …
the measurement of protein synthesis. The greatest asset of D2O labeling is that it facilitates …
MIND4OLIGOS: Determining the Monoisotopic Mass of Oligonucleotides Observed in High-Resolution Mass Spectrometry
Oligonucleotide therapeutics have emerged as an important class of drugs offering targeted
therapeutic strategies that complement traditional modalities, such as monoclonal …
therapeutic strategies that complement traditional modalities, such as monoclonal …
Visualization of proteomics data using R and Bioconductor
Data visualization plays a key role in high‐throughput biology. It is an essential tool for data
exploration allowing to shed light on data structure and patterns of interest. Visualization is …
exploration allowing to shed light on data structure and patterns of interest. Visualization is …
An integrated high resolution mass spectrometric data acquisition method for rapid screening of saponins in Panax notoginseng (Sanqi)
The aim of this study was to develop a convenient method without pretreatments for
nontarget discovery of interested compounds. The segment and exposure strategy, coupled …
nontarget discovery of interested compounds. The segment and exposure strategy, coupled …
Addressing the current bottlenecks of metabolomics: Isotopic Ratio Outlier Analysis™, an isotopic-labeling technique for accurate biochemical profiling
FA de Jong, C Beecher - Bioanalysis, 2012 - Taylor & Francis
> Metabolomics or biochemical profiling is a fast emerging science; however, there are still
many associated bottlenecks to overcome before measurements will be considered robust …
many associated bottlenecks to overcome before measurements will be considered robust …
Automated identification of ions observed in mass spectra of inorganic compounds using isotopic distribution brute force: Methodology and performance …
VV Lebedev, DI Yarykin, AK Buryak - Journal of the American …, 2024 - ACS Publications
This Article describes the method of isotopic distribution brute force, which can be used to
identify ions registered in mass spectra of inorganic compounds in an automated manner …
identify ions registered in mass spectra of inorganic compounds in an automated manner …