[HTML][HTML] How genomics can help biodiversity conservation

K Theissinger, C Fernandes, G Formenti, I Bista… - Trends in genetics, 2023 - cell.com
The availability of public genomic resources can greatly assist biodiversity assessment,
conservation, and restoration efforts by providing evidence for scientifically informed …

[HTML][HTML] Rethinking fish biology and biotechnologies in the challenge era for burgeoning genome resources and strengthening food security

JF Gui, L Zhou, XY Li - Water Biology and Security, 2022 - Elsevier
Fish biology has been developed for more than 100 years, but some important
breakthroughs have been made in the last decade. Early studies commonly concentrated on …

Evolution of the germline mutation rate across vertebrates

LA Bergeron, S Besenbacher, J Zheng, P Li… - Nature, 2023 - nature.com
The germline mutation rate determines the pace of genome evolution and is an evolving
parameter itself. However, little is known about what determines its evolution, as most …

Dsuite ‐ Fast D‐statistics and related admixture evidence from VCF files

M Malinsky, M Matschiner… - Molecular ecology …, 2021 - Wiley Online Library
Patterson's D, also known as the ABBA‐BABA statistic, and related statistics such as the f4‐
ratio, are commonly used to assess evidence of gene flow between populations or closely …

Drivers and dynamics of a massive adaptive radiation in cichlid fishes

F Ronco, M Matschiner, A Böhne, A Boila, HH Büscher… - Nature, 2021 - nature.com
Adaptive radiation is the likely source of much of the ecological and morphological diversity
of life,,–. How adaptive radiations proceed and what determines their extent remains unclear …

Widespread introgression across a phylogeny of 155 Drosophila genomes

A Suvorov, BY Kim, J Wang, EE Armstrong, D Peede… - Current Biology, 2022 - cell.com
Genome-scale sequence data have invigorated the study of hybridization and introgression,
particularly in animals. However, outside of a few notable cases, we lack systematic tests for …

A region of suppressed recombination misleads neoavian phylogenomics

S Mirarab, I Rivas-González, S Feng, J Stiller… - Proceedings of the …, 2024 - pnas.org
Genomes are typically mosaics of regions with different evolutionary histories. When
speciation events are closely spaced in time, recombination makes the regions sharing the …

Newly identified sex chromosomes in the Sphagnum (peat moss) genome alter carbon sequestration and ecosystem dynamics

AL Healey, B Piatkowski, JT Lovell, A Sreedasyam… - Nature Plants, 2023 - nature.com
Peatlands are crucial sinks for atmospheric carbon but are critically threatened due to
warming climates. Sphagnum (peat moss) species are keystone members of peatland …

Understanding explosive diversification through cichlid fish genomics

W Salzburger - Nature Reviews Genetics, 2018 - nature.com
Owing to their taxonomic, phenotypic, ecological and behavioural diversity and propensity
for explosive diversification, the assemblages of cichlid fish in the East African Great Lakes …

Adaptive introgression enables evolutionary rescue from extreme environmental pollution

EM Oziolor, NM Reid, S Yair, KM Lee… - Science, 2019 - science.org
Radical environmental change that provokes population decline can impose constraints on
the sources of genetic variation that may enable evolutionary rescue. Adaptive toxicant …