A practical guide to amplicon and metagenomic analysis of microbiome data

YX Liu, Y Qin, T Chen, M Lu, X Qian, X Guo… - Protein & cell, 2021 - academic.oup.com
Advances in high-throughput sequencing (HTS) have fostered rapid developments in the
field of microbiome research, and massive microbiome datasets are now being generated …

Modulation of the root microbiome by plant molecules: the basis for targeted disease suppression and plant growth promotion

A Pascale, S Proietti, IS Pantelides… - Frontiers in plant …, 2020 - frontiersin.org
Plants host a mesmerizing diversity of microbes inside and around their roots, known as the
microbiome. The microbiome is composed mostly of fungi, bacteria, oomycetes, and …

The phyllosphere microbiome shifts toward combating melanose pathogen

PD Li, ZR Zhu, Y Zhang, J Xu, H Wang, Z Wang, H Li - Microbiome, 2022 - Springer
Background Plants can recruit beneficial microbes to enhance their ability to defend against
pathogens. However, in contrast to the intensively studied roles of the rhizosphere …

[HTML][HTML] Plant microbiome engineering: hopes or hypes

MS Afridi, S Ali, A Salam, W César Terra, A Hafeez… - Biology, 2022 - mdpi.com
Simple Summary Plant microbiome is a key determinant of plant health and productivity.
Plant microbiome is an alternative untapped source that could be harnessed for plant health …

Plant microbiome: an ocean of possibilities for improving disease resistance in plants

S Ali, A Tyagi, H Bae - Microorganisms, 2023 - mdpi.com
Plant diseases pose a serious threat to crop production and the agricultural economy across
the globe. Currently, chemical pesticides are frequently employed to combat these …

Disease-suppressive soils—beyond food production: a critical review

S Jayaraman, AK Naorem, R Lal, RC Dalal… - Journal of Soil Science …, 2021 - Springer
In the pursuit of higher food production and economic growth and increasing population, we
have often jeopardized natural resources such as soil, water, vegetation, and biodiversity at …

Crop microbiome: their role and advances in molecular and omic techniques for the sustenance of agriculture

S Rai, AF Omar, M Rehan, A Al-Turki, A Sagar, N Ilyas… - Planta, 2023 - Springer
Main conclusion This review is an effort to provide in-depth knowledge of microbe's
interaction and its role in crop microbiome using combination of advanced molecular and …

Responses of the rhizosphere bacterial community in acidic crop soil to pH: Changes in diversity, composition, interaction, and function

W Wan, J Tan, Y Wang, Y Qin, H He, H Wu… - Science of the Total …, 2020 - Elsevier
Soil pH is an important predictor of bacterial community composition and diversity.
Examining the effects of pH on diversity, structure, interaction, and function of rhizosphere …

Soil salinity regulation of soil microbial carbon metabolic function in the Yellow River Delta, China

C Yang, D Lv, S Jiang, H Lin, J Sun, K Li… - Science of the Total …, 2021 - Elsevier
The ecological consequences of soil salinization, one of the major causes of soil
degradation worldwide, on soil carbon (C) emissions are well known, but less is known …

A synthetic microbial community of plant core microbiome can be a potential biocontrol tool

Z Wang, X Hu, MK Solanki, F Pang - Journal of Agricultural and …, 2023 - ACS Publications
Microbes are accepted as the foremost drivers of the rhizosphere ecology that influences
plant health in direct or indirect ways. In recent years, the rapid development of gene …