The molecular basis of heterochromatin assembly and epigenetic inheritance

SIS Grewal - Molecular cell, 2023 - cell.com
Heterochromatin plays a fundamental role in gene regulation, genome integrity, and
silencing of repetitive DNA elements. Histone modifications are essential for the …

Functional classification and experimental dissection of long noncoding RNAs

F Kopp, JT Mendell - Cell, 2018 - cell.com
Over the last decade, it has been increasingly demonstrated that the genomes of many
species are pervasively transcribed, resulting in the production of numerous long noncoding …

Getting up to speed with transcription elongation by RNA polymerase II

I Jonkers, JT Lis - Nature reviews Molecular cell biology, 2015 - nature.com
Recent advances in sequencing techniques that measure nascent transcripts and that
reveal the positioning of RNA polymerase II (Pol II) have shown that the pausing of Pol II in …

Senataxin resolves RNA: DNA hybrids forming at DNA double-strand breaks to prevent translocations

S Cohen, N Puget, YL Lin, T Clouaire… - Nature …, 2018 - nature.com
Ataxia with oculomotor apraxia 2 (AOA-2) and amyotrophic lateral sclerosis (ALS4) are
neurological disorders caused by mutations in the gene encoding for senataxin (SETX), a …

The regulation and functions of the nuclear RNA exosome complex

C Kilchert, S Wittmann, L Vasiljeva - Nature Reviews Molecular Cell …, 2016 - nature.com
The RNA exosome complex is the most versatile RNA-degradation machine in eukaryotes.
The exosome has a central role in several aspects of RNA biogenesis, including RNA …

Regulation of long non-coding RNAs and genome dynamics by the RNA surveillance machinery

L Nair, H Chung, U Basu - Nature reviews Molecular cell biology, 2020 - nature.com
Much of the mammalian genome is transcribed, generating long non-coding RNAs
(lncRNAs) that can undergo post-transcriptional surveillance whereby only a subset of the …

Transcription termination and the control of the transcriptome: why, where and how to stop

O Porrua, D Libri - Nature reviews Molecular cell biology, 2015 - nature.com
Transcription termination occurs when the polymerase is released after a transcription event,
thus delimitating transcription units; however, the functional importance of termination …

XRN 5′→ 3′ exoribonucleases: structure, mechanisms and functions

VK Nagarajan, CI Jones, SF Newbury… - Biochimica et Biophysica …, 2013 - Elsevier
The XRN family of 5′→ 3′ exoribonucleases is critical for ensuring the fidelity of cellular
RNA turnover in eukaryotes. Highly conserved across species, the family is typically …

Control of transcriptional elongation

H Kwak, JT Lis - Annual review of genetics, 2013 - annualreviews.org
Elongation is becoming increasingly recognized as a critical step in eukaryotic
transcriptional regulation. Although traditional genetic and biochemical studies have …

Virus-encoded microRNAs: an overview and a look to the future

RP Kincaid, CS Sullivan - PLoS pathogens, 2012 - journals.plos.org
MicroRNAs (miRNAs) are small RNAs that play important roles in the regulation of gene
expression. First described as posttranscriptional gene regulators in eukaryotic hosts, virus …