MRtrix3: A fast, flexible and open software framework for medical image processing and visualisation

JD Tournier, R Smith, D Raffelt, R Tabbara… - Neuroimage, 2019 - Elsevier
MRtrix3 is an open-source, cross-platform software package for medical image processing,
analysis and visualisation, with a particular emphasis on the investigation of the brain using …

Modelling white matter with spherical deconvolution: How and why?

F Dell'Acqua, JD Tournier - NMR in Biomedicine, 2019 - Wiley Online Library
Since the realization that diffusion MRI can probe the microstructural organization and
orientation of biological tissue in vivo and non‐invasively, a multitude of diffusion imaging …

Denoising of diffusion MRI using random matrix theory

J Veraart, DS Novikov, D Christiaens, B Ades-Aron… - Neuroimage, 2016 - Elsevier
We introduce and evaluate a post-processing technique for fast denoising of diffusion-
weighted MR images. By exploiting the intrinsic redundancy in diffusion MRI using universal …

Multi-tissue constrained spherical deconvolution for improved analysis of multi-shell diffusion MRI data

B Jeurissen, JD Tournier, T Dhollander, A Connelly… - NeuroImage, 2014 - Elsevier
Constrained spherical deconvolution (CSD) has become one of the most widely used
methods to extract white matter (WM) fibre orientation information from diffusion-weighted …

SIFT2: Enabling dense quantitative assessment of brain white matter connectivity using streamlines tractography

RE Smith, JD Tournier, F Calamante, A Connelly - Neuroimage, 2015 - Elsevier
Diffusion MRI streamlines tractography allows for the investigation of the brain white matter
pathways non-invasively. However a fundamental limitation of this technology is its non …

A multi-modal, asymmetric, weighted, and signed description of anatomical connectivity

J Tanner, J Faskowitz, AS Teixeira, C Seguin… - Nature …, 2024 - nature.com
The macroscale connectome is the network of physical, white-matter tracts between brain
areas. The connections are generally weighted and their values interpreted as measures of …

Local structure-function relationships in human brain networks across the lifespan

F Zamani Esfahlani, J Faskowitz, J Slack… - Nature …, 2022 - nature.com
A growing number of studies have used stylized network models of communication to predict
brain function from structure. Most have focused on a small set of models applied globally …

Microstructural imaging of the human brain with a 'super-scanner': 10 key advantages of ultra-strong gradients for diffusion MRI

DK Jones, DC Alexander, R Bowtell, M Cercignani… - NeuroImage, 2018 - Elsevier
The key component of a microstructural diffusion MRI 'super-scanner'is a dedicated high-
strength gradient system that enables stronger diffusion weightings per unit time compared …

On the scaling behavior of water diffusion in human brain white matter

J Veraart, E Fieremans, DS Novikov - NeuroImage, 2019 - Elsevier
Abstract Development of therapies for neurological disorders depends on our ability to non-
invasively diagnose and monitor the progression of underlying pathologies at the cellular …

[HTML][HTML] Evaluating fibre orientation dispersion in white matter: Comparison of diffusion MRI, histology and polarized light imaging

J Mollink, M Kleinnijenhuis, AMC van Walsum… - Neuroimage, 2017 - Elsevier
Diffusion MRI is an exquisitely sensitive probe of tissue microstructure, and is currently the
only non-invasive measure of the brain's fibre architecture. As this technique becomes more …