Metabolomics in systems biology
W Weckwerth - Annual review of plant biology, 2003 - annualreviews.org
The primary aim of “omic” technologies is the nontargeted identification of all gene products
(transcripts, proteins, and metabolites) present in a specific biological sample. By their …
(transcripts, proteins, and metabolites) present in a specific biological sample. By their …
Computational and statistical analysis of metabolomics data
Metabolomics is the comprehensive study of small molecule metabolites in biological
systems. By assaying and analyzing thousands of metabolites in biological samples, it …
systems. By assaying and analyzing thousands of metabolites in biological samples, it …
Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth
Annotated genome sequences, can be used to reconstruct whole-cell metabolic networks,,,.
These metabolic networks can be modelled and analysed (computed) to study complex …
These metabolic networks can be modelled and analysed (computed) to study complex …
Engineering secondary metabolite production in plants
R Verpoorte, J Memelink - Current opinion in biotechnology, 2002 - Elsevier
Recent achievements have been made in the metabolic engineering of plant secondary
metabolism. Various pathways have been altered using genes encoding biosynthetic …
metabolism. Various pathways have been altered using genes encoding biosynthetic …
Simultaneous determination of multiple intracellular metabolites in glycolysis, pentose phosphate pathway and tricarboxylic acid cycle by liquid chromatography–mass …
B Luo, K Groenke, R Takors, C Wandrey… - … of chromatography A, 2007 - Elsevier
A highly selective and sensitive method for identification and quantification of intracellular
metabolites involved in central carbon metabolism (including glycolysis, pentose phosphate …
metabolites involved in central carbon metabolism (including glycolysis, pentose phosphate …
Metabolic pathway engineering for enhanced biohydrogen production
J Mathews, G Wang - International journal of hydrogen energy, 2009 - Elsevier
Hydrogen is an ideal, clean, and potentially sustainable energy carrier for the future due to
its abundance and non-polluting nature. Numerous bacteria, cyanobacteria, and algae are …
its abundance and non-polluting nature. Numerous bacteria, cyanobacteria, and algae are …
Develo** Aspergillus as a host for heterologous expression
Filamentous fungi have long been used for production of a range of valuable products; with
the advent of molecular biology, it became apparent that these fungi possess considerable …
the advent of molecular biology, it became apparent that these fungi possess considerable …
Systems biotechnology for strain improvement
Various high-throughput experimental techniques are routinely used for generating large
amounts of omics data. In parallel, in silico modelling and simulation approaches are being …
amounts of omics data. In parallel, in silico modelling and simulation approaches are being …
Minimal cut sets in biochemical reaction networks
S Klamt, ED Gilles - Bioinformatics, 2004 - academic.oup.com
Motivation: Structural studies of metabolic networks yield deeper insight into topology,
functionality and capabilities of the metabolisms of different organisms. Here, we address …
functionality and capabilities of the metabolisms of different organisms. Here, we address …
Metabolomics: current state and evolving methodologies and tools
In recent years, metabolomics developed to an accepted and valuable tool in life sciences.
Substantial improvements of analytical hardware allow metabolomics to run routinely now …
Substantial improvements of analytical hardware allow metabolomics to run routinely now …