Finding the genomic basis of local adaptation: pitfalls, practical solutions, and future directions
Uncovering the genetic and evolutionary basis of local adaptation is a major focus of
evolutionary biology. The recent development of cost-effective methods for obtaining high …
evolutionary biology. The recent development of cost-effective methods for obtaining high …
Detecting natural selection in genomic data
The past fifty years have seen the development and application of numerous statistical
methods to identify genomic regions that appear to be shaped by natural selection. These …
methods to identify genomic regions that appear to be shaped by natural selection. These …
YTHDF1 links hypoxia adaptation and non-small cell lung cancer progression
Y Shi, S Fan, M Wu, Z Zuo, X Li, L Jiang, Q Shen… - Nature …, 2019 - nature.com
Hypoxia occurs naturally at high-altitudes and pathologically in hypoxic solid tumors. Here,
we report that genes involved in various human cancers evolved rapidly in Tibetans and six …
we report that genes involved in various human cancers evolved rapidly in Tibetans and six …
Impacts of allopolyploidization and structural variation on intraspecific diversification in Brassica rapa
Background Despite the prevalence and recurrence of polyploidization in the speciation of
flowering plants, its impacts on crop intraspecific genome diversification are largely …
flowering plants, its impacts on crop intraspecific genome diversification are largely …
Genome-wide scan for adaptive divergence and association with population-specific covariates
M Gautier - Genetics, 2015 - academic.oup.com
In population genomics studies, accounting for the neutral covariance structure across
population allele frequencies is critical to improve the robustness of genome-wide scan …
population allele frequencies is critical to improve the robustness of genome-wide scan …
Signature selection analysis reveals candidate genes associated with production traits in Iranian sheep breeds
L Mohamadipoor Saadatabadi… - BMC veterinary …, 2021 - Springer
Background Sheep were among the first animals to be domesticated. They are raised all
over the world and produce a major scale of animal-based protein for human consumption …
over the world and produce a major scale of animal-based protein for human consumption …
Subgenome parallel selection is associated with morphotype diversification and convergent crop domestication in Brassica rapa and Brassica oleracea
F Cheng, R Sun, X Hou, H Zheng, F Zhang, Y Zhang… - Nature …, 2016 - nature.com
Brassica species, including crops such as cabbage, turnip and oilseed, display enormous
phenotypic variation. Brassica genomes have all undergone a whole-genome triplication …
phenotypic variation. Brassica genomes have all undergone a whole-genome triplication …
Natural selection and infectious disease in human populations
EK Karlsson, DP Kwiatkowski, PC Sabeti - Nature Reviews Genetics, 2014 - nature.com
The ancient biological'arms race'between microbial pathogens and humans has shaped
genetic variation in modern populations, and this has important implications for the growing …
genetic variation in modern populations, and this has important implications for the growing …
Fast principal-component analysis reveals convergent evolution of ADH1B in Europe and East Asia
Searching for genetic variants with unusual differentiation between subpopulations is an
established approach for identifying signals of natural selection. However, existing methods …
established approach for identifying signals of natural selection. However, existing methods …
Genetics in geographically structured populations: defining, estimating and interpreting FST
Wright's F-statistics, and especially F ST, provide important insights into the evolutionary
processes that influence the structure of genetic variation within and among populations …
processes that influence the structure of genetic variation within and among populations …