Deciphering drug resistance in Mycobacterium tuberculosis using whole-genome sequencing: progress, promise, and challenges

KA Cohen, AL Manson, CA Desjardins, T Abeel… - Genome medicine, 2019 - Springer
Tuberculosis (TB) is a global infectious threat that is intensified by an increasing incidence of
highly drug-resistant disease. Whole-genome sequencing (WGS) studies of Mycobacterium …

The heterogeneous evolution of multidrug-resistant Mycobacterium tuberculosis

B Müller, S Borrell, G Rose, S Gagneux - Trends in Genetics, 2013 - cell.com
Recent surveillance data of multidrug-resistant tuberculosis (MDR-TB) reported the highest
rates of resistance ever documented. As further amplification of resistance in MDR strains of …

Evolution of Extensively Drug-Resistant Tuberculosis over Four Decades: Whole Genome Sequencing and Dating Analysis of Mycobacterium tuberculosis Isolates …

KA Cohen, T Abeel, A Manson McGuire… - PLoS …, 2015 - journals.plos.org
Background The continued advance of antibiotic resistance threatens the treatment and
control of many infectious diseases. This is exemplified by the largest global outbreak of …

Emergence and spread of extensively and totally drug-resistant tuberculosis, South Africa

M Klopper, RM Warren, C Hayes… - Emerging infectious …, 2013 - pmc.ncbi.nlm.nih.gov
Factors driving the increase in drug-resistant tuberculosis (TB) in the Eastern Cape
Province, South Africa, are not understood. A convenience sample of 309 drug-susceptible …

Putative Compensatory Mutations in the rpoC Gene of Rifampin-Resistant Mycobacterium tuberculosis Are Associated with Ongoing Transmission

M De Vos, B Müller, S Borrell, PA Black… - Antimicrobial agents …, 2013 - journals.asm.org
Rifampin resistance in clinical isolates of Mycobacterium tuberculosis arises primarily
through the selection of bacterial variants harboring mutations in the 81-bp rifampin …

The epidemiology, transmission, diagnosis, and management of drug-resistant tuberculosis—lessons from the South African experience

K Naidoo, R Perumal, H Cox, B Mathema… - The Lancet Infectious …, 2024 - thelancet.com
Drug-resistant tuberculosis (DR-TB) threatens to derail tuberculosis control efforts,
particularly in Africa where the disease remains out of control. The dogma that DR-TB …

Data for action: collection and use of local data to end tuberculosis

G Theron, HE Jenkins, F Cobelens, I Abubakar… - The Lancet, 2015 - thelancet.com
Accelerating progress in the fight against tuberculosis will require a drastic shift from a
strategy focused on control to one focused on elimination. Successful disease elimination …

Bibliometric analysis of worldwide publications on multi-, extensively, and totally drug–resistant tuberculosis (2006–2015)

WM Sweileh, AS AbuTaha, AF Sawalha… - Multidisciplinary …, 2016 - Springer
Background The year 2015 marked the end of United Nations Millennium Development
Goals which was aimed at halting and reversing worldwide tuberculosis (TB). The …

Geospatial distribution of Mycobacterium tuberculosis genotypes in Africa

VN Chihota, A Niehaus, EM Streicher, X Wang… - PLoS …, 2018 - journals.plos.org
Objective To investigate the distribution of Mycobacterium tuberculosis genotypes across
Africa. Methods The SITVIT2 global repository and PUBMED were searched for spoligotype …

Epidemic spread of multidrug-resistant tuberculosis in Johannesburg, South Africa

BJ Marais, CK Mlambo, N Rastogi, T Zozio… - Journal of clinical …, 2013 - journals.asm.org
Numerous reports have documented isolated transmission events or clonal outbreaks of
multidrug-resistant Mycobacterium tuberculosis strains, but knowledge of their epidemic …