Co-transcriptional gene regulation in eukaryotes and prokaryotes

M Shine, J Gordon, L Schärfen, D Zigackova… - … Reviews Molecular Cell …, 2024 - nature.com
Many steps of RNA processing occur during transcription by RNA polymerases. Co-
transcriptional activities are deemed commonplace in prokaryotes, in which the lack of …

Proximate and ultimate causes of the bactericidal action of antibiotics

F Baquero, BR Levin - Nature Reviews Microbiology, 2021 - nature.com
During the past 85 years of antibiotic use, we have learned a great deal about how these
'miracle'drugs work. We know the molecular structures and interactions of these drugs and …

Structural basis of Rho-dependent transcription termination

V Molodtsov, C Wang, E Firlar, JT Kaelber, RH Ebright - Nature, 2023 - nature.com
Rho is a ring-shaped hexameric ATP-dependent molecular motor. Together with the
transcription elongation factor NusG, Rho mediates factor-dependent transcription …

In-cell architecture of an actively transcribing-translating expressome

FJ O'Reilly, L Xue, A Graziadei, L Sinn, S Lenz… - Science, 2020 - science.org
Structural biology studies performed inside cells can capture molecular machines in action
within their native context. In this work, we developed an integrative in-cell structural …

Condition-Dependent Transcriptome Reveals High-Level Regulatory Architecture in Bacillus subtilis

P Nicolas, U Mäder, E Dervyn, T Rochat, A Leduc… - Science, 2012 - science.org
Bacteria adapt to environmental stimuli by adjusting their transcriptomes in a complex
manner, the full potential of which has yet to be established for any individual bacterial …

Mechanisms of bacterial transcription termination: all good things must end

A Ray-Soni, MJ Bellecourt… - Annual review of …, 2016 - annualreviews.org
Transcript termination is essential for accurate gene expression and the removal of RNA
polymerase (RNAP) at the ends of transcription units. In bacteria, two mechanisms are …

Functionally uncoupled transcription–translation in Bacillus subtilis

GE Johnson, JB Lalanne, ML Peters, GW Li - Nature, 2020 - nature.com
Tight coupling of transcription and translation is considered a defining feature of bacterial
gene expression,. The pioneering ribosome can both physically associate and kinetically …

[HTML][HTML] Bacteriophage lambda: Early pioneer and still relevant

SR Casjens, RW Hendrix - Virology, 2015 - Elsevier
Molecular genetic research on bacteriophage lambda carried out during its golden age from
the mid-1950s to mid-1980s was critically important in the attainment of our current …

The anti-Shine–Dalgarno sequence drives translational pausing and codon choice in bacteria

GW Li, E Oh, JS Weissman - Nature, 2012 - nature.com
Protein synthesis by ribosomes takes place on a linear substrate but at non-uniform speeds.
Transient pausing of ribosomes can affect a variety of co-translational processes, including …

Structural basis of transcription-translation coupling

C Wang, V Molodtsov, E Firlar, JT Kaelber, G Blaha… - Science, 2020 - science.org
In bacteria, transcription and translation are coupled processes in which the movement of
RNA polymerase (RNAP)–synthesizing messenger RNA (mRNA) is coordinated with the …