Extraribosomal Functions of Bacterial Ribosomal Proteins—An Update, 2023

LV Aseev, LS Koledinskaya, IV Boni - International Journal of Molecular …, 2024 - mdpi.com
Ribosomal proteins (r-proteins) are abundant, highly conserved, and multifaceted cellular
proteins in all domains of life. Most r-proteins have RNA-binding properties and can form …

Emerging quantitative biochemical, structural, and biophysical methods for studying ribosome and protein–RNA complex assembly

K Gor, O Duss - Biomolecules, 2023 - mdpi.com
Ribosome assembly is one of the most fundamental processes of gene expression and has
served as a playground for investigating the molecular mechanisms of how protein–RNA …

NusG inhibits RNA polymerase backtracking by stabilizing the minimal transcription bubble

M Turtola, GA Belogurov - Elife, 2016 - elifesciences.org
Universally conserved factors from NusG family bind at the upstream fork junction of
transcription elongation complexes and modulate RNA synthesis in response to translation …

Structure-based mechanisms of a molecular RNA polymerase/chaperone machine required for ribosome biosynthesis

YH Huang, T Hilal, B Loll, J Bürger, T Mielke… - Molecular cell, 2020 - cell.com
Bacterial ribosomal RNAs are synthesized by a dedicated, conserved transcription-
elongation complex that transcribes at high rates, shields RNA polymerase from premature …

Processive antitermination

JR Goodson, WC Winkler - Microbiology spectrum, 2018 - journals.asm.org
Transcription is a discontinuous process, where each nucleotide incorporation cycle offers a
decision between elongation, pausing, halting, or termination. Many cis-acting regulatory …

Nusbiarylins, a new class of antimicrobial agents: Rational design of bacterial transcription inhibitors targeting the interaction between the NusB and NusE proteins

Y Qiu, ST Chan, L Lin, TL Shek, TF Tsang, Y Zhang… - Bioorganic …, 2019 - Elsevier
Discovery of antibiotics of a novel mode of action is highly required in the fierce battlefield
with multi-drug resistant bacterial infections. Previously we have validated the protein …

Ancient transcription factors in the news

I Artsimovitch, SH Knauer - MBio, 2019 - journals.asm.org
In every cell from bacteria to mammals, NusG-like proteins bind transcribing RNA
polymerase to modulate the rate of nascent RNA synthesis and to coordinate it with …

Translation initiation factor IF2 contributes to ribosome assembly and maturation during cold adaptation

A Brandi, L Piersimoni, NA Feto, R Spurio… - Nucleic Acids …, 2019 - academic.oup.com
Cold-stress in Escherichia coli induces de novo synthesis of translation initiation factors IF1,
IF2 and IF3 while ribosome synthesis and assembly slow down. Consequently, the …

Roles of the leader-trailer helix and antitermination complex in biogenesis of the 30S ribosomal subunit

BR Warner, R Bundschuh, K Fredrick - Nucleic Acids Research, 2023 - academic.oup.com
Ribosome biogenesis occurs co-transcriptionally and entails rRNA folding, ribosomal
protein binding, rRNA processing, and rRNA modification. In most bacteria, the 16S, 23S …

[HTML][HTML] Composition of transcription machinery and its crosstalk with nucleoid-associated proteins and global transcription factors

G Muskhelishvili, P Sobetzko, S Mehandziska… - Biomolecules, 2021 - mdpi.com
The coordination of bacterial genomic transcription involves an intricate network of
interdependent genes encoding nucleoid-associated proteins (NAPs), DNA …