Probiotics and competitive exclusion of pathogens in shrimp aquaculture

H Knipe, B Temperton, A Lange, D Bass… - Reviews in …, 2021 - Wiley Online Library
Probiotics, live microorganisms that, when administered in adequate amounts, confer a
health benefit on the host, offer an alternative to antibiotics and have become popular …

Root of the tree: the significance, evolution, and origins of the ribosome

JC Bowman, AS Petrov, M Frenkel-Pinter… - Chemical …, 2020 - ACS Publications
The ribosome is an ancient molecular fossil that provides a telescope to the origins of life.
Made from RNA and protein, the ribosome translates mRNA to coded protein in all living …

Spatial transcriptomics of planktonic and sessile bacterial populations at single-cell resolution

D Dar, N Dar, L Cai, DK Newman - Science, 2021 - science.org
INTRODUCTION Microbial populations display heterogeneous gene expression profiles that
result in phenotypic differences between individual bacteria. This diversity can allow …

Parvimonas micra, Peptostreptococcus stomatis, Fusobacterium nucleatum and Akkermansia muciniphila as a four-bacteria biomarker panel of colorectal cancer

MA Osman, H Neoh, NS Ab Mutalib, SF Chin… - Scientific Reports, 2021 - nature.com
Dysbiosis of the gut microbiome has been associated with the pathogenesis of colorectal
cancer (CRC). We profiled the microbiome of gut mucosal tissues from 18 CRC patients and …

Principles of cellular resource allocation revealed by condition-dependent proteome profiling

E Metzl-Raz, M Kafri, G Yaakov, I Soifer, Y Gurvich… - Elife, 2017 - elifesciences.org
Growing cells coordinate protein translation with metabolic rates. Central to this coordination
is ribosome production. Ribosomes drive cell growth, but translation of ribosomal proteins …

Whole-cell modeling in yeast predicts compartment-specific proteome constraints that drive metabolic strategies

IE Elsemman, A Rodriguez Prado, P Grigaitis… - Nature …, 2022 - nature.com
When conditions change, unicellular organisms rewire their metabolism to sustain cell
maintenance and cellular growth. Such rewiring may be understood as resource re …

Lymphocyte innateness defined by transcriptional states reflects a balance between proliferation and effector functions

M Gutierrez-Arcelus, N Teslovich, AR Mola… - Nature …, 2019 - nature.com
How innate T cells (ITC), including invariant natural killer T (iNKT) cells, mucosal-associated
invariant T (MAIT) cells, and γδ T cells, maintain a poised effector state has been unclear …

Suboptimal resource allocation in changing environments constrains response and growth in bacteria

R Balakrishnan, RT de Silva, T Hwa… - Molecular systems …, 2021 - embopress.org
To respond to fluctuating conditions, microbes typically need to synthesize novel proteins.
As this synthesis relies on sufficient biosynthetic precursors, microbes must devise effective …

Ribosome-binding antibiotics increase bacterial longevity and growth efficiency

E Wood, H Schulenburg, P Rosenstiel… - Proceedings of the …, 2023 - National Acad Sciences
Antibiotics, by definition, reduce bacterial growth rates in optimal culture conditions;
however, the real-world environments bacteria inhabit see rapid growth punctuated by …

Bacterial inclusion bodies are industrially exploitable amyloids

A De Marco, N Ferrer-Miralles… - FEMS microbiology …, 2019 - academic.oup.com
Understanding the structure, functionalities and biology of functional amyloids is an issue of
emerging interest. Inclusion bodies, namely protein clusters formed in recombinant bacteria …