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How do intrinsically disordered protein regions encode a driving force for liquid–liquid phase separation?
Highlights•Not all IDRs undergo liquid–liquid phase separation.•IDRs are not necessary for
protein phase separation.•A stickers-and-spacers framework helps conceptualizing IDR …
protein phase separation.•A stickers-and-spacers framework helps conceptualizing IDR …
Fundamental aspects of phase-separated biomolecular condensates
Biomolecular condensates, formed through phase separation, are upending our
understanding in much of molecular, cell, and developmental biology. There is an urgent …
understanding in much of molecular, cell, and developmental biology. There is an urgent …
LASSI: A lattice model for simulating phase transitions of multivalent proteins
Many biomolecular condensates form via spontaneous phase transitions that are driven by
multivalent proteins. These molecules are biological instantiations of associative polymers …
multivalent proteins. These molecules are biological instantiations of associative polymers …
Comparative roles of charge, π, and hydrophobic interactions in sequence-dependent phase separation of intrinsically disordered proteins
Endeavoring toward a transferable, predictive coarse-grained explicit-chain model for
biomolecular condensates underlain by liquid–liquid phase separation (LLPS) of proteins …
biomolecular condensates underlain by liquid–liquid phase separation (LLPS) of proteins …
Complete phase diagram for liquid–liquid phase separation of intrinsically disordered proteins
A number of intrinsically disordered proteins have been shown to self-assemble via liquid–
liquid phase separation into protein-rich and dilute phases. The resulting coacervates can …
liquid phase separation into protein-rich and dilute phases. The resulting coacervates can …
Simulation of FUS protein condensates with an adapted coarse-grained model
Disordered proteins and nucleic acids can condense into droplets that resemble the
membraneless organelles observed in living cells. MD simulations offer a unique tool to …
membraneless organelles observed in living cells. MD simulations offer a unique tool to …
Theories for sequence-dependent phase behaviors of biomolecular condensates
Liquid–liquid phase separation and related condensation processes of intrinsically
disordered proteins (IDPs), proteins with intrinsically disordered regions, and nucleic acids …
disordered proteins (IDPs), proteins with intrinsically disordered regions, and nucleic acids …
Cell cycle-specific phase separation regulated by protein charge blockiness
H Yamazaki, M Takagi, H Kosako, T Hirano… - Nature Cell …, 2022 - nature.com
Dynamic morphological changes of intracellular organelles are often regulated by protein
phosphorylation or dephosphorylation,,,,–. Phosphorylation modulates stereospecific …
phosphorylation or dephosphorylation,,,,–. Phosphorylation modulates stereospecific …
Clustering of aromatic residues in prion-like domains can tune the formation, state, and organization of biomolecular condensates: published as part of the …
In immature oocytes, Balbiani bodies are conserved membraneless condensates implicated
in oocyte polarization, the organization of mitochondria, and long-term organelle and RNA …
in oocyte polarization, the organization of mitochondria, and long-term organelle and RNA …
Temperature, hydrostatic pressure, and osmolyte effects on liquid–liquid phase separation in protein condensates: physical chemistry and biological implications
H Cinar, Z Fetahaj, S Cinar, RM Vernon… - … A European Journal, 2019 - Wiley Online Library
Liquid–liquid phase separation (LLPS) of proteins and other biomolecules play a critical role
in the organization of extracellular materials and membrane‐less compartmentalization of …
in the organization of extracellular materials and membrane‐less compartmentalization of …