The multimodal brain tumor image segmentation benchmark (BRATS)

BH Menze, A Jakab, S Bauer… - IEEE transactions on …, 2014 - ieeexplore.ieee.org
In this paper we report the set-up and results of the Multimodal Brain Tumor Image
Segmentation Benchmark (BRATS) organized in conjunction with the MICCAI 2012 and …

Towards a universal taxonomy of macro-scale functional human brain networks

LQ Uddin, BT Yeo, RN Spreng - Brain topography, 2019 - Springer
The past decade has witnessed a proliferation of studies aimed at characterizing the human
connectome. These projects map the brain regions comprising large-scale systems …

Automated anatomical labeling of activations in SPM using a macroscopic anatomical parcellation of the MNI MRI single-subject brain

N Tzourio-Mazoyer, B Landeau, D Papathanassiou… - Neuroimage, 2002 - Elsevier
An anatomical parcellation of the spatially normalized single-subject high-resolution T1
volume provided by the Montreal Neurological Institute (MNI)(DL Collins et al., 1998, Trans …

Improved optimization for the robust and accurate linear registration and motion correction of brain images

M Jenkinson, P Bannister, M Brady, S Smith - Neuroimage, 2002 - Elsevier
Linear registration and motion correction are important components of structural and
functional brain image analysis. Most modern methods optimize some intensity-based cost …

AFNI: software for analysis and visualization of functional magnetic resonance neuroimages

RW Cox - Computers and Biomedical research, 1996 - Elsevier
A package of computer programs for analysis and visualization of three-dimensional human
brain functional magnetic resonance imaging (FMRI) results is described. The software can …

Cortical surface-based analysis: I. Segmentation and surface reconstruction

AM Dale, B Fischl, MI Sereno - Neuroimage, 1999 - Elsevier
Several properties of the cerebral cortex, including its columnar and laminar organization, as
well as the topographic organization of cortical areas, can only be properly understood in …

[HTML][HTML] Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain

B Fischl, DH Salat, E Busa, M Albert, M Dieterich… - Neuron, 2002 - cell.com
We present a technique for automatically assigning a neuroanatomical label to each voxel in
an MRI volume based on probabilistic information automatically estimated from a manually …

High-throughput discovery of novel developmental phenotypes

ME Dickinson, AM Flenniken, X Ji, L Teboul, MD Wong… - Nature, 2016 - nature.com
Approximately one-third of all mammalian genes are essential for life. Phenotypes resulting
from knockouts of these genes in mice have provided tremendous insight into gene function …

Neuromaps: structural and functional interpretation of brain maps

RD Markello, JY Hansen, ZQ Liu, V Bazinet, G Shafiei… - Nature …, 2022 - nature.com
Imaging technologies are increasingly used to generate high-resolution reference maps of
brain structure and function. Comparing experimentally generated maps to these reference …

A global optimisation method for robust affine registration of brain images

M Jenkinson, S Smith - Medical image analysis, 2001 - Elsevier
Registration is an important component of medical image analysis and for analysing large
amounts of data it is desirable to have fully automatic registration methods. Many different …