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Next-generation proteomics: towards an integrative view of proteome dynamics
Next-generation sequencing allows the analysis of genomes, including those representing
disease states. However, the causes of most disorders are multifactorial, and systems-level …
disease states. However, the causes of most disorders are multifactorial, and systems-level …
Quantitative, high-resolution proteomics for data-driven systems biology
Systems biology requires comprehensive data at all molecular levels. Mass spectrometry
(MS)-based proteomics has emerged as a powerful and universal method for the global …
(MS)-based proteomics has emerged as a powerful and universal method for the global …
OpenCell: Endogenous tagging for the cartography of human cellular organization
Elucidating the wiring diagram of the human cell is a central goal of the postgenomic era.
We combined genome engineering, confocal live-cell imaging, mass spectrometry, and data …
We combined genome engineering, confocal live-cell imaging, mass spectrometry, and data …
ALIX-and ESCRT-III–dependent sorting of tetraspanins to exosomes
The intraluminal vesicles (ILVs) of endosomes mediate the delivery of activated signaling
receptors and other proteins to lysosomes for degradation, but they also modulate …
receptors and other proteins to lysosomes for degradation, but they also modulate …
ESCRT-dependent membrane repair negatively regulates pyroptosis downstream of GSDMD activation
Pyroptosis is a lytic form of cell death that is induced by inflammatory caspases upon
activation of the canonical or noncanonical inflammasome pathways. These caspases …
activation of the canonical or noncanonical inflammasome pathways. These caspases …
[HTML][HTML] A molecular grammar governing the driving forces for phase separation of prion-like RNA binding proteins
Proteins such as FUS phase separate to form liquid-like condensates that can harden into
less dynamic structures. However, how these properties emerge from the collective …
less dynamic structures. However, how these properties emerge from the collective …
RNA buffers the phase separation behavior of prion-like RNA binding proteins
Prion-like RNA binding proteins (RBPs) such as TDP43 and FUS are largely soluble in the
nucleus but form solid pathological aggregates when mislocalized to the cytoplasm. What …
nucleus but form solid pathological aggregates when mislocalized to the cytoplasm. What …
ESCRT‐mediated lysosome repair precedes lysophagy and promotes cell survival
M Radulovic, KO Schink, EM Wenzel, V Nähse… - The EMBO …, 2018 - embopress.org
Although lysosomes perform a number of essential cellular functions, damaged lysosomes
represent a potential hazard to the cell. Such lysosomes are therefore engulfed by …
represent a potential hazard to the cell. Such lysosomes are therefore engulfed by …
Genome-wide and high-density CRISPR-Cas9 screens identify point mutations in PARP1 causing PARP inhibitor resistance
SJ Pettitt, DB Krastev, I Brandsma, A Dréan… - Nature …, 2018 - nature.com
Although PARP inhibitors (PARPi) target homologous recombination defective tumours,
drug resistance frequently emerges, often via poorly understood mechanisms. Here, using …
drug resistance frequently emerges, often via poorly understood mechanisms. Here, using …
An aberrant phase transition of stress granules triggered by misfolded protein and prevented by chaperone function
Stress granules (SG) are membrane‐less compartments involved in regulating mRNAs
during stress. Aberrant forms of SGs have been implicated in age‐related diseases, such as …
during stress. Aberrant forms of SGs have been implicated in age‐related diseases, such as …