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Stochastic switching in biology: from genotype to phenotype
PC Bressloff - Journal of Physics A: Mathematical and …, 2017 - iopscience.iop.org
There has been a resurgence of interest in non-equilibrium stochastic processes in recent
years, driven in part by the observation that the number of molecules (genes, mRNA …
years, driven in part by the observation that the number of molecules (genes, mRNA …
[BOOK][B] Stochastic processes in cell biology
PC Bressloff - 2014 - Springer
One of the major challenges in modern biology is to understand how the molecular
components of a living cell operate in a highly noisy environment. What are the specific …
components of a living cell operate in a highly noisy environment. What are the specific …
[HTML][HTML] First order transition to oscillation death through an environment
The emergence of dynamical abrupt transitions for the first time in an ensemble of identical
limit-cycle and chaotic oscillators coupled via a common environment is reported. The …
limit-cycle and chaotic oscillators coupled via a common environment is reported. The …
An asymptotic analysis of a 2-D model of dynamically active compartments coupled by bulk diffusion
J Gou, MJ Ward - Journal of Nonlinear Science, 2016 - Springer
A class of coupled cell–bulk ODE–PDE models is formulated and analyzed in a two-
dimensional domain, which is relevant to studying quorum-sensing behavior on thin …
dimensional domain, which is relevant to studying quorum-sensing behavior on thin …
Traveling waves in response to a diffusing quorum sensing signal in spatially-extended bacterial colonies
In the behavior known as quorum sensing (QS), bacteria release diffusible signal molecules
known as autoinducers, which by accumulating in the environment induce population-wide …
known as autoinducers, which by accumulating in the environment induce population-wide …
[HTML][HTML] Suppression and revival of oscillation in indirectly coupled limit cycle oscillators
We study the phenomena of suppression and revival of oscillations in a system of limit cycle
oscillators coupled indirectly via a dynamic local environment. The dynamics of the …
oscillators coupled indirectly via a dynamic local environment. The dynamics of the …
Achieving criticality for reservoir computing using environment-induced explosive death
The network of oscillators coupled via a common environment has been widely studied due
to its great abundance in nature. We exploit the occurrence of explosive oscillation …
to its great abundance in nature. We exploit the occurrence of explosive oscillation …
Synchronization and quorum sensing in an ensemble of indirectly coupled chaotic oscillators
The fact that the elements in some realistic systems are influenced by each other indirectly
through a common environment has stimulated a new surge of studies on the collective …
through a common environment has stimulated a new surge of studies on the collective …
Oscillation suppression in indirectly coupled limit cycle oscillators
We study the phenomena of oscillation quenching in a system of limit cycle oscillators which
are coupled indirectly via a dynamic environment. The dynamics of the environment is …
are coupled indirectly via a dynamic environment. The dynamics of the environment is …
A theory of synchrony by coupling through a diffusive chemical signal
We formulate and analyze oscillatory dynamics associated with a model of dynamically
active, but spatially segregated, compartments that are coupled through a chemical signal …
active, but spatially segregated, compartments that are coupled through a chemical signal …