Mass spectrometry-based protein footprinting for higher-order structure analysis: fundamentals and applications

XR Liu, MM Zhang, ML Gross - Chemical reviews, 2020 - ACS Publications
Proteins adopt different higher-order structures (HOS) to enable their unique biological
functions. Understanding the complexities of protein higher-order structures and dynamics …

Advances in hydrogen/deuterium exchange mass spectrometry and the pursuit of challenging biological systems

EI James, TA Murphree, C Vorauer, JR Engen… - Chemical …, 2021 - ACS Publications
Solution-phase hydrogen/deuterium exchange (HDX) coupled to mass spectrometry (MS) is
a widespread tool for structural analysis across academia and the biopharmaceutical …

Hydrogen exchange mass spectrometry for studying protein structure and dynamics

L Konermann, J Pan, YH Liu - Chemical Society Reviews, 2011 - pubs.rsc.org
Hydrogen/deuterium exchange (HDX) mass spectrometry (MS) has become a key technique
for monitoring structural and dynamic aspects of proteins in solution. This approach relies on …

[HTML][HTML] Assembly of a GPCR-G protein complex

Y Du, NM Duc, SGF Rasmussen, D Hilger, X Kubiak… - Cell, 2019 - cell.com
The activation of G proteins by G protein-coupled receptors (GPCRs) underlies the majority
of transmembrane signaling by hormones and neurotransmitters. Recent structures of GPCR …

Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome

Y Shi, X Chen, S Elsasser, BB Stocks, G Tian, BH Lee… - Science, 2016 - science.org
INTRODUCTION The ubiquitin-proteasome system comprises hundreds of distinct pathways
of degradation, which converge at the step of ubiquitin recognition by the proteasome. Five …

Conformational changes in the G protein Gs induced by the β2 adrenergic receptor

KY Chung, SGF Rasmussen, T Liu, S Li, BT DeVree… - Nature, 2011 - nature.com
G protein-coupled receptors represent the largest family of membrane receptors that
instigate signalling through nucleotide exchange on heterotrimeric G proteins. Nucleotide …

[HTML][HTML] Correction of both NBD1 energetics and domain interface is required to restore ΔF508 CFTR folding and function

WM Rabeh, F Bossard, H Xu, T Okiyoneda, M Bagdany… - Cell, 2012 - cell.com
The folding and misfolding mechanism of multidomain proteins remains poorly understood.
Although thermodynamic instability of the first nucleotide-binding domain (NBD1) of ΔF508 …

Visualizing transient dark states by NMR spectroscopy

NJ Anthis, GM Clore - Quarterly Reviews of Biophysics, 2015 - cambridge.org
Myriad biological processes proceed through states that defy characterization by
conventional atomic-resolution structural biological methods. The invisibility of these …

Contemporary hydrogen deuterium exchange mass spectrometry

I Oganesyan, C Lento, DJ Wilson - Methods, 2018 - Elsevier
Hydrogen/deuterium exchange (HDX) mass spectrometry (MS) emerged as a tool for
biochemistry and structural biology around 25 years ago. It has since become a key …

Orthosteric and allosteric action of the C5a receptor antagonists

H Liu, HR Kim, RNVK Deepak, L Wang… - Nature structural & …, 2018 - nature.com
The C5a receptor (C5aR) is a G-protein-coupled receptor (GPCR) that can induce strong
inflammatory response to the anaphylatoxin C5a. Targeting C5aR has emerged as a novel …