Oscillatory dynamics in a bacterial cross-protection mutualism
Cooperation between microbes can enable microbial communities to survive in harsh
environments. Enzymatic deactivation of antibiotics, a common mechanism of antibiotic …
environments. Enzymatic deactivation of antibiotics, a common mechanism of antibiotic …
Whole-genome screens reveal regulators of differentiation state and context-dependent migration in human neutrophils
Neutrophils are the most abundant leukocyte in humans and provide a critical early line of
defense as part of our innate immune system. We perform a comprehensive, genome-wide …
defense as part of our innate immune system. We perform a comprehensive, genome-wide …
FlowCal: a user-friendly, open source software tool for automatically converting flow cytometry data from arbitrary to calibrated units
Flow cytometry is widely used to measure gene expression and other molecular biological
processes with single cell resolution via fluorescent probes. Flow cytometers output data in …
processes with single cell resolution via fluorescent probes. Flow cytometers output data in …
FlowKit: a python toolkit for integrated manual and automated cytometry analysis workflows
An important challenge for primary or secondary analysis of cytometry data is how to
facilitate productive collaboration between domain and quantitative experts. Domain experts …
facilitate productive collaboration between domain and quantitative experts. Domain experts …
Self-cleaving peptides for expression of multiple genes in Dictyostelium discoideum
The social amoeba Dictyostelium discoideum is a model for a wide range of biological
processes including chemotaxis, cell-cell communication, phagocytosis, and development …
processes including chemotaxis, cell-cell communication, phagocytosis, and development …
Role of a holo-insertase complex in the biogenesis of biophysically diverse ER membrane proteins
Mammalian membrane proteins perform essential physiologic functions that rely on their
accurate insertion and folding at the endoplasmic reticulum (ER). Using forward and arrayed …
accurate insertion and folding at the endoplasmic reticulum (ER). Using forward and arrayed …
A function of TPL/TBL1-type corepressors is to nucleate the assembly of the preinitiation complex
AR Leydon, B Downing, J Solano Sanchez… - Journal of Cell …, 2024 - rupress.org
The plant corepressor TPL is recruited to diverse chromatin contexts, yet its mechanism of
repression remains unclear. Previously, we leveraged the fact that TPL retains its function in …
repression remains unclear. Previously, we leveraged the fact that TPL retains its function in …
A phosphatase‐centric mechanism drives stress signaling response
Changing environmental cues lead to the adjustment of cellular physiology by
phosphorylation signaling networks that typically center around kinases as active effectors …
phosphorylation signaling networks that typically center around kinases as active effectors …
Rediversification following ecotype isolation reveals hidden adaptive potential
Microbial communities play a critical role in ecological processes, and their diversity is key to
their functioning. However, little is known about whether communities can regenerate …
their functioning. However, little is known about whether communities can regenerate …
Automated yeast cultivation control using a biosensor and flow cytometry
RP Foncillas, S Magnusson… - Journal of Industrial …, 2024 - academic.oup.com
Effective microbial bioprocessing relies on maintaining ideal cultivation conditions,
highlighting the necessity for tools that monitor and regulate cellular performance and …
highlighting the necessity for tools that monitor and regulate cellular performance and …