We present a general setting for structure-sequence comparison in a large class of RNA
structures, that unifies and generalizes a number of recent works on specific families of …

Redesign of the controller for an AdeptOne robot is described. The focus is on the
production of controllable torque from the Adept's nonlinear, three-phase variable …

RNA molecules are composed of modular architectural units that define their unique
structural and functional properties. Characterization of these building blocks can help …

Dual graphs have been applied to model RNA secondary structures with pseudoknots, or
intertwined base pairs. In this paper we present a linear-time algorithm to partition dual …

RNA is a fundamental building block for all living cells and has a variety of different
functions. It plays numerous distinct and imperative roles in molecular biology ie to localize …

The problem of predicting ribonucleic acid (RNA) structure with pseudoknots makes it NP–
hard. To find optimal RNA pseudoknotted structure, we investigate the RNA pseudoknotted …

A two-level particle swarm optimization (TL-PSO) algorithm is proposed for training
stochastic context-sensitive hidden Markov model (cs-HMM), that addresses a thrust area of …

We propose, in maximum likelihood sense, an optimal method for the affine fundamental
matrix estimation in the presence of both Gaussian noise and outliers. It is based on …

Motivation: Structural alignment of RNA is found to be a useful computational technique for
idenitfying non-coding RNAs (ncRNAs). However, existing tools do not handle structures …

RNA molecules play major roles in all cell processes, and therefore have been subject to a
great attention by biologists, biochemists and bioinformaticians in the recent years. From a …