Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
We present two standards developed by the Genomic Standards Consortium (GSC) for
reporting bacterial and archaeal genome sequences. Both are extensions of the Minimum …
reporting bacterial and archaeal genome sequences. Both are extensions of the Minimum …
Major new microbial groups expand diversity and alter our understanding of the tree of life
The recent recovery of genomes for organisms from phyla with no isolated representative
(candidate phyla) via cultivation-independent genomics enabled delineation of major new …
(candidate phyla) via cultivation-independent genomics enabled delineation of major new …
DRAM for distilling microbial metabolism to automate the curation of microbiome function
Microbial and viral communities transform the chemistry of Earth's ecosystems, yet the
specific reactions catalyzed by these biological engines are hard to decode due to the …
specific reactions catalyzed by these biological engines are hard to decode due to the …
Biosynthetic capacity, metabolic variety and unusual biology in the CPR and DPANN radiations
Candidate phyla radiation (CPR) bacteria and DPANN (an acronym of the names of the first
included phyla) archaea are massive radiations of organisms that are widely distributed …
included phyla) archaea are massive radiations of organisms that are widely distributed …
Ecology of the oral microbiome: beyond bacteria
Although great strides have been made in understanding the complex bacterial community
inhabiting the human oral cavity, for a variety of (mainly technical) reasons the ecological …
inhabiting the human oral cavity, for a variety of (mainly technical) reasons the ecological …
[HTML][HTML] A short history of RubisCO: the rise and fall (?) of Nature's predominant CO2 fixing enzyme
Highlights•RubisCO evolved into Nature's predominant CO 2-fixing enzyme in three distinct
steps.•RubisCO evolved from a non-CO 2-fixing ancestral enzyme into a true …
steps.•RubisCO evolved from a non-CO 2-fixing ancestral enzyme into a true …
Expansive microbial metabolic versatility and biodiversity in dynamic Guaymas Basin hydrothermal sediments
Abstract Microbes in Guaymas Basin (Gulf of California) hydrothermal sediments thrive on
hydrocarbons and sulfur and experience steep, fluctuating temperature and chemical …
hydrocarbons and sulfur and experience steep, fluctuating temperature and chemical …
Rubisco function, evolution, and engineering
Carbon fixation is the process by which CO2 is converted from a gas into biomass. The
Calvin–Benson–Bassham cycle (CBB) is the dominant carbon-consuming pathway on …
Calvin–Benson–Bassham cycle (CBB) is the dominant carbon-consuming pathway on …
The fate of organic carbon in marine sediments-New insights from recent data and analysis
Organic carbon in marine sediments is a critical component of the global carbon cycle, and
its degradation influences a wide range of phenomena, including the magnitude of carbon …
its degradation influences a wide range of phenomena, including the magnitude of carbon …
[HTML][HTML] The bright side of microbial dark matter: lessons learned from the uncultivated majority
Highlights•Recent discoveries from metagenomics and single cell genomics.•Metabolic
features of the uncultivated majority.•Success stories of cultivating microbial dark …
features of the uncultivated majority.•Success stories of cultivating microbial dark …