Cell free DNA as a diagnostic and prognostic marker for cardiovascular diseases

IA Polina, DV Ilatovskaya, KY DeLeon-Pennell - Clinica Chimica Acta, 2020 - Elsevier
Release of cell free DNA (cfDNA) from damaged or dead cells routinely occurs in normal
physiology. Recently, cfDNA has emerged as an essential biomarker in cardiovascular …

[HTML][HTML] Bioinformatics analysis for circulating cell-free DNA in cancer

CC Huang, M Du, L Wang - Cancers, 2019 - mdpi.com
Molecular analysis of cell-free DNA (cfDNA) that circulates in plasma and other body fluids
represents a “liquid biopsy” approach for non-invasive cancer screening or monitoring. The …

StratoLAMP: Label-free, multiplex digital loop-mediated isothermal amplification based on visual stratification of precipitate

M **, J Ding, Y Zhou, J Chen, Y Wang, Z Li - Proceedings of the National …, 2024 - pnas.org
Multiplex, digital nucleic acid detections have important biomedical applications, but the
multiplexity of existing methods is predominantly achieved using fluorescent dyes or probes …

[HTML][HTML] Analysis of IL-6 serum levels and CAR T cell-specific digital PCR in the context of cytokine release syndrome

T Pabst, R Joncourt, E Shumilov, A Heini… - Experimental …, 2020 - Elsevier
Introduction Chimeric antigen receptor T-cell (CAR-T) therapies are increasingly used to
treat relapsed B-cell lymphomas and acute lymphoblastic leukemia. Considering the …

Genetic profiling of cancer with circulating tumor DNA analysis

L Lu, J Bi, L Bao - Journal of Genetics and Genomics, 2018 - Elsevier
Circulating cell-free tumor DNA (ctDNA) in the blood is DNA released from apoptotic,
circulating, and living tumor cells. ctDNA is about 140 nt in length and has a half-life of about …

Signatures of discriminative copy number aberrations in 31 cancer subtypes

B Gao, M Baudis - Frontiers in genetics, 2021 - frontiersin.org
Copy number aberrations (CNA) are one of the most important classes of genomic mutations
related to oncogenetic effects. In the past three decades, a vast amount of CNA data has …

Circulating tumor DNA, liquid biopsy, and next generation sequencing: A comprehensive technical and clinical applications review

S Abou Daya, R Mahfouz - Meta Gene, 2018 - Elsevier
Circulating tumor DNA (ctDNA) represents a small fraction of the total circulating free DNA
and its analysis is increasingly used for diagnostic, prognostic and treatment purposes of …

Cell-free DNA BRAF V600E measurements during BRAF inhibitor therapy of metastatic melanoma: long-term analysis

K Kozak, A Kowalik, A Gos, B Wasag… - Tumori …, 2020 - journals.sagepub.com
Objective: We assessed the status of the BRAF V600E mutation in cell-free circulating tumor
DNA (cfDNA) isolated from the plasma of patients with metastatic melanoma treated with the …

[HTML][HTML] Therapeutic monitoring of circulating DNA mutations in metastatic cancer with personalized digital PCR

CM Wood-Bouwens, D Haslem, B Moulton… - The Journal of Molecular …, 2020 - Elsevier
As a high-performance solution for longitudinal monitoring of patients being treated for
metastatic cancer, a single-color digital PCR (dPCR) assay that detects and quantifies …

Single-copy detection of somatic variants from solid and liquid biopsy

AL Silva, PK Powalowska, M Stolarek, ER Gray… - Scientific reports, 2021 - nature.com
Accurate detection of somatic variants, against a background of wild-type molecules, is
essential for clinical decision making in oncology. Existing approaches, such as allele …