Cis-regulatory sequences in plants: their importance, discovery, and future challenges

RJ Schmitz, E Grotewold, M Stam - The plant cell, 2022 - academic.oup.com
The identification and characterization of cis-regulatory DNA sequences and how they
function to coordinate responses to developmental and environmental cues is of paramount …

Transcriptional regulation of drought response: a tortuous network of transcriptional factors

D Singh, A Laxmi - Frontiers in plant science, 2015 - frontiersin.org
Drought is one of the leading factors responsible for the reduction in crop yield worldwide.
Due to climate change, in future, more areas are going to be affected by drought and for …

An integrated analysis of plant and bacterial gene expression in symbiotic root nodules using laser‐capture microdissection coupled to RNA sequencing

B Roux, N Rodde, MF Jardinaud, T Timmers… - The Plant …, 2014 - Wiley Online Library
Rhizobium‐induced root nodules are specialized organs for symbiotic nitrogen fixation.
Indeterminate‐type nodules are formed from an apical meristem and exhibit a spatial …

Dancing to a different tune, can we switch from chemical to biological nitrogen fixation for sustainable food security?

MY Jhu, GED Oldroyd - PLoS Biology, 2023 - journals.plos.org
Our current food production systems are unsustainable, driven in part through the
application of chemically fixed nitrogen. We need alternatives to empower farmers to …

The transcription factor bZIP68 negatively regulates cold tolerance in maize

Z Li, D Fu, X Wang, R Zeng, X Zhang, J Tian… - The Plant …, 2022 - academic.oup.com
Maize (Zea mays) originated in tropical areas and is thus susceptible to low temperatures,
which pose a major threat to maize production. Our understanding of the molecular basis of …

CYCLOPS, a DNA-binding transcriptional activator, orchestrates symbiotic root nodule development

S Singh, K Katzer, J Lambert, M Cerri, M Parniske - Cell host & microbe, 2014 - cell.com
Nuclear calcium oscillations are a hallmark of symbiotically stimulated plant root cells.
Activation of the central nuclear decoder, calcium-and calmodulin-dependent kinase …

The promiscuous life of plant NUCLEAR FACTOR Y transcription factors

K Petroni, RW Kumimoto, N Gnesutta… - The Plant …, 2012 - academic.oup.com
The CCAAT box is one of the most common cis-elements present in eukaryotic promoters
and is bound by the transcription factor NUCLEAR FACTOR Y (NF-Y). NF-Y is composed of …

The Arabidopsis thaliana Nuclear Factor Y Transcription Factors

H Zhao, D Wu, F Kong, K Lin, H Zhang… - Frontiers in plant …, 2017 - frontiersin.org
Nuclear factor Y (NF-Y) is an evolutionarily conserved trimeric transcription factor complex
present in nearly all eukaryotes. The heterotrimeric NF-Y complex consists of three subunits …

Battles and hijacks: noncoding transcription in plants

F Ariel, N Romero-Barrios, T Jégu, M Benhamed… - Trends in plant …, 2015 - cell.com
Noncoding RNAs have emerged as major components of the eukaryotic transcriptome.
Genome-wide analyses revealed the existence of thousands of long noncoding RNAs …

A distal CCAAT/NUCLEAR FACTOR Y complex promotes chromatin loo** at the FLOWERING LOCUS T promoter and regulates the timing of flowering in …

S Cao, RW Kumimoto, N Gnesutta, AM Calogero… - The Plant …, 2014 - academic.oup.com
For many plant species, reproductive success relies on the proper timing of flowering, and
photoperiod provides a key environmental input. Photoperiod-dependent flowering depends …