Cross-linking mass spectrometry (XL-MS): An emerging technology for interactomics and structural biology
Protein-protein interactions are fundamental to the formation of intricate interaction networks
and the assembly of multisubunit protein complexes that represent the functional …
and the assembly of multisubunit protein complexes that represent the functional …
Crosslinking and mass spectrometry: an integrated technology to understand the structure and function of molecular machines
A Leitner, M Faini, F Stengel, R Aebersold - Trends in biochemical …, 2016 - cell.com
In recent years, chemical crosslinking of protein complexes and the identification of
crosslinked residues by mass spectrometry (XL-MS; sometimes abbreviated as CX-MS) has …
crosslinked residues by mass spectrometry (XL-MS; sometimes abbreviated as CX-MS) has …
Inert and seed-competent tau monomers suggest structural origins of aggregation
Tauopathies feature progressive accumulation of tau amyloids. Pathology may begin when
these amplify from a protein template, or seed, whose structure is unknown. We have …
these amplify from a protein template, or seed, whose structure is unknown. We have …
Improvements, trends, and new ideas in molecular docking: 2012–2013 in review
Molecular docking is a computational method for predicting the placement of ligands in the
binding sites of their receptor (s). In this review, we discuss the methodological …
binding sites of their receptor (s). In this review, we discuss the methodological …
Efficient and robust proteome-wide approaches for cross-linking mass spectrometry
O Klykov, B Steigenberger, S Pektaş, D Fasci… - Nature protocols, 2018 - nature.com
Cross-linking mass spectrometry (XL-MS) has received considerable interest, owing to its
potential to investigate protein–protein interactions (PPIs) in an unbiased fashion in complex …
potential to investigate protein–protein interactions (PPIs) in an unbiased fashion in complex …
Cross‐linking/mass spectrometry for studying protein structures and protein–protein interactions: where are we now and where should we go from here?
A Sinz - Angewandte Chemie International Edition, 2018 - Wiley Online Library
Structural mass spectrometry (MS) is gaining increasing importance for deriving valuable
three‐dimensional structural information on proteins and protein complexes, and it …
three‐dimensional structural information on proteins and protein complexes, and it …
Distance restraints from crosslinking mass spectrometry: mining a molecular dynamics simulation database to evaluate lysine–lysine distances
Integrative structural biology attempts to model the structures of protein complexes that are
challenging or intractable by classical structural methods (due to size, dynamics, or …
challenging or intractable by classical structural methods (due to size, dynamics, or …
Leveraging crosslinking mass spectrometry in structural and cell biology
Crosslinking mass spectrometry (crosslinking-MS) is a versatile tool providing structural
insights into protein conformation and protein-protein interactions. Its medium-resolution …
insights into protein conformation and protein-protein interactions. Its medium-resolution …
Chemical cross-linking/mass spectrometry targeting acidic residues in proteins and protein complexes
A Leitner, LA Joachimiak… - Proceedings of the …, 2014 - National Acad Sciences
The study of proteins and protein complexes using chemical cross-linking followed by the
MS identification of the cross-linked peptides has found increasingly widespread use in …
MS identification of the cross-linked peptides has found increasingly widespread use in …
Protocols for molecular modeling with Rosetta3 and RosettaScripts
Previously, we published an article providing an overview of the Rosetta suite of
biomacromolecular modeling software and a series of step-by-step tutorials [Kaufmann, KW …
biomacromolecular modeling software and a series of step-by-step tutorials [Kaufmann, KW …